Publications

2012

Allain, B., Hu, M., Lovat, L. B., Cook, R. J., Vercauteren, T., Ourselin, S., Hawkes, D. J. (2012). Re-localisation of a biopsy site in endoscopic images and characterisation of its uncertainty. Med Image Anal16(2), 482-496 doi:10.1016/j.media.2011.11.005.

Dikaios, N., Fujiwara, T., Abd Alazeez, M., Atkinson, D., Punwani, S. (2012). Diagnostic modelling of multi-parametric MRI as a radiological tool to predict transition zone prostate cancer. ISMRM 2012. ( pp.547-).

Dikaios, N., Fujiwara, T., Atkinson, D., Punwani, S. (2012). Artificial neural networks in radiological predictive models. ISMRM 2012. ( pp.2560-).

Dikaios, N., Punwani, S., Hamy, V., Purpura, P., Fitzke, H., Rice, S., Taylor, S., Atkinson, D. (2012). Maximum likelihood ADC parameter estimates improve selection of metastatic cervical nodes for patients with head and neck squamous cell cancer. ISMRM 2012. ( pp.3579-).

Fonteijn, H. M., Modat, M., Clarkson, M. J., Barnes, J., Lehmann, M., Hobbs, N. Z., Scahill, R. I., Tabrizi, S. J., Ourselin, S., Fox, N. C., Alexander, D. C. (2012). An event-based model for disease progression and its application in familial Alzheimer's disease and Huntington's disease. Neuroimage60(3), 1880-1889 doi:10.1016/j.neuroimage.2012.01.062.

Griffin, L. D., Elangovan, P., Mundell, A., Hezel, D. C. (2012). Improved segmentation of meteorite micro-CT images using local histograms. COMPUTERS & GEOSCIENCES39 doi:10.1016/j.cageo.2011.07.002. Author URL

Hamy, V., Melbourne, A., Tremoulheac, B., Punwani, S., Atkinson, D. (2012). Registration of DCE-MRI using robust data decomposition. ISMRM 2012. ( pp.749-).

Hamy, V., Walker-Samuel, S., Atkinson, D., Punwani, S. (2012). Apparent diffusion coefficient estimation in prostate DW-MRI using maximum likelihood. ISMRM 2012. ( pp.1854-).

Han, L., Hipwell, J. H., Tanner, C., Taylor, Z., Mertzanidou, T., Cardoso, J., Ourselin, S., Hawkes, D. J. (2012). Development of patient-specific biomechanical models for predicting large breast deformation. Phys Med Biol57(2), 455-472 doi:10.1088/0031-9155/57/2/455.

Hu, Y., Ahmed, H. U., Carter, T., Arumainayagam, N., Lecornet, E., Barzell, W., Freeman, A., Nevoux, P., Hawkes, D. J., Villers, A., Emberton, M., Barratt, D. C. (2012). A biopsy simulation study to assess the accuracy of several transrectal ultrasonography (TRUS)-biopsy strategies compared with template prostate mapping biopsies in patients who have undergone radical prostatectomy. BJU Int doi:10.1111/j.1464-410X.2012.10933.x.

Kleinnijenhuis, M., Barth, M., Alexander, D. C., van Cappellen van Walsum, A. -. M., Norris, D. G. (2012). Structure Tensor Informed Fiber Tractography (STIFT) by combining gradient echo MRI and diffusion weighted imaging. NeuroImage59(4), 3941-3954

Kowalik, G. T., Steeden, J. A., Pandya, B., Atkinson, D., Taylor, A. M., Muthurangu, V. (2012). Continuous assessment of cardiac output during exercise using real time flow with fast GPU reconstruction. 15th annual Society for Cardiovascular Magnetic Resonance. ( Vol. 14 pp.232-).

Kowalik, G. T., Steeden, J. A., Pandya, B., Atkinson, D., Taylor, A. M., Muthurangu, V. (2012). Real time flow with fast GPU reconstruction for continuous assessment of cardiac output. 15th Annual SCMR. ( Vol. 14 pp.W63-).

Kowalik, G., Steeden, J. A., Pandya, B., Atkinson, D., Taylor, A., Muthurangu, V. (2012). Real time flow with fast GPU reconstruction for continuous assessment of cardiac output. ISMRM 2012. ( pp.1178-).

Mallik, C., Bandula, S., Rice, S., Atkinson, D., Taylor, S., Moon, J., Punwani, S. (2012). Optimisation of the bolus and infusion protocol for equilibrium magnetic resonance imaging. ISMRM 2012. ( pp.4085-).

Menys, A., Atkinson, D., Punwani, S., Proctor, I., Novelli, M., Rodriguez-Justo, M., Hawkes, D. J., Halligan, S., Taylor, S. (2012). MRI-derived small bowel motility as a marker of disease activity in Crohn’s disease using a histopathological standard of reference. ECR. ( pp.B-0054-).

Menys, A., Helbren, E., Makanyanga, J., Halligan, S., Atkinson, D., Taylor, S. (2012). Small bowel strictures in Crohn’s Disease: A quantitative investigation of intestinal motility using MR Enterography. ISMRM 2012. ( pp.407-).

Menys, A., Odille, F., Punwani, S., Novelli, M., Rodriguez-Justo, M., Halligan, S., Atkinson, D., Taylor, S. (2012). MRI derived small bowel motility as a marker of Crohn’s disease activity. ISMRM 2012. ( pp.1274-).

Newell, A. J., MORGAN, R., Bull, P. A., Griffin, L. D., Graham, G. (2012). Automated texture recognition of quartz sand grains for forensic analysis for forensic applications. Journal of Forensic Sciences [Accepted]

Panagiotaki, E., Schneider, T., Siow, B., Hall, M. G., Lythgoe, M. F., Alexander, D. C. (2012). Compartment models of the diffusion MR signal in brain white matter: A taxonomy and comparison. NeuroImage59(3), 2241-2254

Punwani, S., Purpura, P., Dikaios, N., Fitzke, H., Bainbridge, A., Price, D., Rice, S., Morley, S., Beale, T., Mendes, R., Forster, M., Carnell, D., Vaitilingam, T., Newton, N., Atkinson, D., Halligan, S., Taylor, S. (2012). Multi-scale analysis of apparent diffusion coefficient (ADC) predicts cervical nodal status in patients with head & neck squamous cell carcinoma. ISMRM 2012. ( pp.1052-).

Siow, B., Drobnjak, I., Chatterjee, A., Lythgoe, M. F., Alexander, D. C. (2012). Estimation of pore size in a microstructure phantom using the optimised gradient waveform diffusion weighted NMR sequence. J Magn Reson214(1), 51-60 doi:10.1016/j.jmr.2011.10.004.

Steeden, J. A., Atkinson, D., Jones, A., Muthurangu, V. (2012). High resolution slice-selective Fourier Velocity Encoding using spiral SENSE with velocity unwrap. 15th annual Society for Cardiovascular Magnetic Resonance. ( Vol. 14 pp.O40-).

Steeden, J. A., Atkinson, D., Jones, A., Muthurangu, V. (2012). Velocity unwrap for high resolution slice-selective Fourier Velocity Encoding using spiral SENSE. 15th annual Society for Cardiovascular Magnetic Resonance. ( Vol. 14 pp.W25-).

Steeden, J. A., Jones, A., Atkinson, D., Taylor, A. M., Muthurangu, V. (2012). Velocity unwrap for high resolution slice-selective Fourier velocity encoding using spiral SENSE. ISMRM 2012. ( pp.672-).

Usman, M., Kolbitsch, C., Vaillant, G., Atkinson, D., Schaeffter, T., Batchelor, P. G., Prieto, C. (2012). A frame work for non-rigid motion corrected compressed sensing for highly accelerated MRI. ISMRM 2012. ( pp.72-).

Zhang, H., Dyrby, T. B., Alexander, D. C. (2012). Axon diameter mapping in crossing fibers with diffusion MRI. Proceedings of the international society for magnetic resonance in medicine. ( Vol. 20 ).

Zhang, H., Schneider, T., Wheeler-Kingshott, C. A., Alexander, D. C. (2012). NODDI: practical in vivo neurite orientation dispersion and density imaging of the human brain. Neuroimage doi:10.1016/j.neuroimage.2012.03.072.

Zhang, H., Schneider, T., Wheeler-Kingshott, C., Alexander, D. C. (2012). NODDI: Practical in vivo neurite orientation dispersion and density imaging of the human brain. Proceedings of the international society for magnetic resonance in medicine. ( Vol. 20 ).

2011

Abascal, J. F. P. J., Lionheart, W. R. B., Arridge, S. R., Schweiger, M., ATKINSON, D., Holder, D. S. (2011). Electrical impedance tomography in anisotropic media with known eigenvectors. Inverse Problems27(6), 065004- doi:10.1088/0266-5611/27/6/065004. Publisher URL

Arridge, S. R. (2011). Methods in diffuse optical imaging. PHILOS T R SOC A369(1955), 4558-4576 doi:10.1098/rsta.2011.0311.

Brostow, G. J., Hernandez, C., Vogiatzis, G., Stenger, B., Cipolla, R. (2011). Video Normals from Colored Lights. IEEE T PATTERN ANAL33(10), 2104-2114 doi:10.1109/TPAMI.2011.37.

Cleary, J. O., Modat, M., Norris, F. C., Price, A. N., Jayakody, S. A., Martinez-Barbera, J. P., Greene, N. D., Hawkes, D. J., Ordidge, R. J., Scambler, P. J., Ourselin, S., Lythgoe, M. F. (2011). Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping. Neuroimage54(2), 769-778 doi:10.1016/j.neuroimage.2010.07.039.

Daga, P., Winston, G., Modat, M., Cardoso, M. J., Stretton, J., Symms, M., McEvoy, A. W., Hawkes, D., Duncan, J., Ourselin, S. (2011). Integrating structural and diffusion MR information for optic radiation localisation in focal epilepsy patients. Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on. ( pp.353-356). Publisher URL

Daga, P., Winston, G., Modat, M., White, M., Mancini, L., Cardoso, M., Symms, M., Hawkes, D., Duncan, J., Ourselin, S. (2011). Accurate Localization of Optic Radiation During Neurosurgery in an Interventional MRI Suite. IEEE Trans Med Imaging doi:10.1109/TMI.2011.2179668.

Deligianni, F., Robinson, E., Sharp, D., Edwards, A. D., Rueckert, D., Alexander, D. C. (2011). Exploiting hierarchy in structural brain networks. Proceedings - International Symposium on Biomedical Imaging, 871-874

Drobnjak, I., Alexander, D. C. (2011). Optimising time-varying gradient orientation for microstructure sensitivity in diffusion-weighted MR. J Magn Reson212(2), 344-354 doi:10.1016/j.jmr.2011.07.017.

Drobnjak, I., Zhang, H., Hall, M. G., Alexander, D. C. (2011). The matrix formalism for generalised gradients with time-varying orientation in diffusion NMR. J Magn Reson210(1), 151-157 doi:10.1016/j.jmr.2011.02.022.

Drobnjak, I., Zhang, H., Hall, M. G., Alexander, D. C. (2011). The matrix formalism for generalised gradients with time-varying orientation in diffusion NMR. Journal of Magnetic Resonance210(1), 151-157

Dyrby, T. B., Baaré, W. F., Alexander, D. C., Jelsing, J., Garde, E., Søgaard, L. V. (2011). An Ex Vivo Imaging Pipeline for Producing High-Quality and High-Resolution Diffusion-Weighted Imaging Datasets. Hum Brain Mapp32(4), 544-563 doi:10.1002/hbm.21043.

Fonteijn, H. M., Clarkson, M. J., Modat, M., Barnes, J., Lehmann, M., Ourselin, S., Fox, N. C., Alexander, D. C. (2011). An event-based disease progression model and its application to familial Alzheimer's disease. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). ( Vol. 6801 LNCS pp.748-759).

Fonteijn, H., Clarkson, M., Modat, M., Barnes, J., Lehmann, M., Ourselin, S., Fox, N., Alexander, D. (2011). An event-based disease progression model and its application to familial Alzheimer's disease. ( Vol. 6801 pp.748-759-748-759). Springer Berlin / Heidelberg. Publisher URL

Griffin, L., Wahab, M. (2011). Similar things look similar. PERCEPTION40(1), 110-111

Hamy, V., Atkinson, D., Walker-Samuel, S., Punwani, S. (2011). Comparison of least squares and maximum likelihood for apparent diffusion coefficient estimation in prostate diffusion-weighted MRI (DW-MRI). RSNA 2011. ( pp.LL-INE1160-TUA-).

Hamy, V., Walker-Samuel, S., Punwani, S., Atkinson, D. (2011). Comparison of least squares and maximum likelihood for apparent diffusion coefficient estimation in prostate DW-MRI. MIUA 2011. ( Vol. Poster 2-35 ).

Hu, Y., Carter, T. J., Ahmed, H. U., Emberton, M., Allen, C., Hawkes, D. J., Barratt, D. C. (2011). Modelling Prostate Motion for Data Fusion During Image-Guided Interventions. IEEE Trans Med Imaging30(11), 1887-1900 doi:10.1109/TMI.2011.2158235.

Johnsen, S. F., Clark, C., Atkinson, D. (2011). Registration of low-SNR high-resolution diffusion-weighted images. MIUA 2011. ( Vol. Poster 1-40 ).

Kazantsev, D., Bousse, A., Pedemonte, S., Arridge, S. R., Hutton, B. F., Ourselin, S. (2011). EDGE PRESERVING BOWSHER PRIOR WITH NONLOCAL WEIGHTING FOR 3D SPECT RECONSTRUCTION. Proceedings - International Symposium on Biomedical Imaging, 1158-1161

Kleinnijenhuis, M., Barth, M., Alexander, D. C., van Cappellen van Walsum, A. -. M., Norris, D. G. (2011). Structure Tensor Informed Fiber Tractography (STIFT) by combining gradient echo MRI and diffusion weighted imaging. NeuroImage

Kolehmainen, V., Tarvainen, T., Arridge, S. R., Kaipio, J. P. (2011). Marginalization of uninteresting parameters in inverse problems – application to diffuse opticaltomography. International Journal for Uncertainty Quantification1(1), 1-17

Kowalik, G., Steeden, J. A., ATKINSON, D., Muthurangu, V. (2011). A networked GPU reconstructor within the clinical workflow for rapid fat quantification. ISMRM 2011. ( pp.2708-).

Kunz, N., Zhang, H., O'brien, K. R., Assaf, Y., Alexander, D. C., Lazeyras, F., Hüppi1, P. S. (2011). Probing microstructural information using the CHARMED model in the non-myelinated human newborn brain at 3T. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM 2011): 19th Annual Meeting and Exhibition. ( Vol. 19 pp.2489-2489). Berkeley, US: ISMRM. Publisher URL

MORGAN, G. L., Zhang, H., Whitcher, B., Alexander, D. C. (2011). A framework for modelling the regional variation of white matter microstructure. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM 2011): 19th Annual Meeting and Exhibition. ( Vol. 19 pp.1929-1929). Berkeley, US: ISMRM. Publisher URL

MORGAN, G., Zhang, H., Whitcher, B., Alexander, D. C. (2011). Regional variation models of white matter microstructure. Proceedings of the organization for human brain mapping. ( Vol. 17 ).

Martelli, F., Del Bianco, S., Zaccanti, G., Liemert, A., Kienle, A., Schweiger, M., Arridge, S. R., Prepara, S., Jelzow, A., Wabnitz, H., Zolek, N., Liebert, A. (2011). Comparison of independent forward solvers for photon migration through layered media. OPTICAL TOMOGRAPHY AND SPECTROSCOPY OF TISSUE IX. ( Vol. 7896 ). Author URL

McClelland, J. R., Hughes, S., Modat, M., Qureshi, A., Ahmad, S., Landau, D. B., Ourselin, S., Hawkes, D. J. (2011). Inter-fraction variations in respiratory motion models. Phys Med Biol56(1), 251-272 doi:10.1088/0031-9155/56/1/015.

McGinty, J., Stuckey, D. W., Soloviev, V. Y., Laine, R., Wylezinska-Arridge, M., Wells, D. J., Arridge, S. R., French, P. M. W., Hajnal, J. V., Sardini, A. (2011). In vivo fluorescence lifetime tomography of a FRET probe expressed in mouse. BIOMEDICAL OPTICS EXPRESS2 Author URL

Melbourne, A., Cahill, N. D., Tanner, C., Hawkes, D. J., IEEE, (2011). IMAGE REGISTRATION USING AN EXTENDABLE QUADRATIC REGULARISER. 2011 8TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO. Author URL

Melbourne, A., Hipwell, J., Modat, M., Mertzanidou, T., Huisman, H., Ourselin, S., Hawkes, D. J. (2011). The effect of motion correction on pharmacokinetic parameter estimation in dynamic-contrast-enhanced MRI. Phys Med Biol56(24), 7693-7708 doi:10.1088/0031-9155/56/24/001.

Menys, A., Ahmed, A., Punwani, S., Odille, F., Steward, M., ATKINSON, D., Hawkes, D. J., Halligan, S., Taylor, S. A. (2011). Quantified small bowel motility during MR enterography in Crohn’s disease as a marker of inflammatory activity. ESGAR 2011.

Modat, M., Ridgway, G. R., Daga, P., Cardoso, M. J., Hawkes, D. J., Ashburner, J., Ourselin, S. (2011). Log-Euclidean free-form deformation. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. ( Vol. 7962 ).

Mohan, P. S., Soloviev, V. Y., Arridge, S. R. (2011). Discontinuous Galerkin method for the forward modelling in optical diffusion tomography. INT J NUMER METH ENG85(5), 562-574 doi:10.1002/nme.2974.

Mohan, P. S., Tarvainen, T., Schweiger, M., Pulkkinen, A., Arridge, S. R. (2011). Variable order spherical harmonic expansion scheme for the radiative transport equation using finite elements. J COMPUT PHYS230(19), 7364-7383 doi:10.1016/j.jcp.2011.06.004.

Odille, F., Menys, A., Ahmed, A., Punwani, S., Taylor, S., ATKINSON, D. (2011). Quantitative assessment of small bowel motility by nonrigid registration of dynamic MR images. ISMRM 2011. ( pp.3022-).

Odille, F., Steeden, J. A., Muthurangu, V., Atkinson, D. (2011). Automatic Segmentation Propagation of the Aorta in Real-Time Phase Contrast MRI Using Nonrigid Registration. J Magn Reson Imaging33(1), 232-238 doi:10.1002/jmri.22402.

Panagiotaki, E., Schneider, T., Siow, B., Lythgoe, M. F., Hall, M. G., Alexander, D. C. (2011). A hierarchy of analytic models for the diffusion MRI signal in brain white matter. Proceedings of the 19th meeting of the International society for magnetic resonance in medicine 2011.

Pinto Pereira, S. M., McCormack, V. A., Hipwell, J. H., Record, C., Wilkinson, L. S., Moss, S. M., Hawkes, D. J., dos-Santos-Silva, I. (2011). Localized Fibroglandular Tissue as a Predictor of Future Tumor Location within the Breast. Cancer Epidemiol Biomarkers Prev20(8), 1718-1725 doi:10.1158/1055-9965.EPI-11-0423.

Reynolds, M., Doboš, J., Peel, L., Weyrich, T., Brostow, G. (2011). Capturing Time-of-Flight Data with Confidence. Proc. of IEEE Conference on Computer Vision and Pattern Recognition (CVPR). ( pp.1-8).

Roth, H. R., McClelland, J. R., Boone, D. J., Modat, M., Cardoso, M. J., Hampshire, T. E., Hu, M., Punwani, S., Ourselin, S., Slabaugh, G. G., Halligan, S., Hawkes, D. J. (2011). Registration of the endoluminal surfaces of the colon derived from prone and supine CT colonography. Medical Physics38(6), 3077-3089 doi:10.1118/1.3577603. Publisher URL

SIOW, B., Cleary, J. O., Greene, N. D., Daga, P., Modat, M., Ordidge, R., Ourselin, S., Alexander, D. A., Lythgoe, M. F. (2011). Mouse Embryo Phenotyping with Contrast-enhanced micro-Diffusion Tensor Imaging. 19th meeting of the International Society for Magnetic Resonance in Medicine.

SIOW, B., Drobnjak, I., Lythgoe, M. F., Alexander, D. C. (2011). Optimised Gradient Waveform Spin-Echo sequence for Diffusion Weighted MR in a Microstructure Phantom. 19th meeting of the International Society for Magnetic Resonance in Medicine.

Schneider, T., Thomas, D. L., Kachramanoglou, C., Ciccarelli, O., Alexander, D. C., Wheeler-Kingshott, C. (2011). Fuzzy partial volume correction of spinal cord DTI parameters. Proc. Intl. Soc. Mag. Reson. Med. ( Vol. 19 pp.4556-).

Soloviev, V. Y., Arridge, S. R. (2011). Fluorescence lifetime optical tomography in weakly scattering media in the presence of highly scattering inclusions. J OPT SOC AM A28(7), 1513-1523

Soloviev, V. Y., Arridge, S. R. (2011). Optical Tomography in weakly scattering media in the presence of highly scattering inclusions. BIOMEDICAL OPTICS EXPRESS2 doi:10.1364/BOE.2.000440. Author URL

Soloviev, V. Y., Arridge, S. R. (2011). Optical projection tomography for light scattering media. DIFFUSE OPTICAL IMAGING III. ( Vol. 8088 ). SPIE-INT SOC OPTICAL ENGINEERING.

Soloviev, V. Y., Bassi, A., Fieramonti, L., Valentini, G., D'Andrea, C., Arridge, S. R. (2011). Angularly selective mesoscopic tomography. PHYSICAL REVIEW E84, ARTN 051915 doi:10.1103/PhysRevE.84.051915. Author URL

Soloviev, V. Y., McGinty, J., Stuckey, D. W., Laine, R., Wylezinska-Arridge, M., Wells, D. J., Sardini, A., Hajnal, J. V., French, P. M. W., Arridge, S. R. (2011). Forster resonance energy transfer imaging in vivo with approximated radiative transfer equation. APPLIED OPTICS50 Author URL

Somayajula, S., Panagiotou, C., Rangarajan, A., Li, Q. Z., Arridge, S. R., Leahy, R. M. (2011). PET Image Reconstruction Using Information Theoretic Anatomical Priors. IEEE T MED IMAGING30(3), 537-549 doi:10.1109/TMI.2010.2076827.

Steeden, J. A., ATKINSON, D., Hansen, M. S., Taylor, A. M., Muthurangu, V. (2011). Rapid Flow Assessment of Congenital Heart Disease with High-Spatiotemporal-Resolution Gated Spiral Phase-Contrast MR Imaging. Radiology260(1), 79-87 doi:10.1148/radiol.11101844.

Steeden, J. A., ATKINSON, D., Taylor, A. M., Muthurangu, V. (2011). Rapid flow assessment of congenital heart disease using high spatio-temporal gated spiral phase-contrast. SCMR 2011.

Tanner, C., White, M., Guarino, S., Hall-Craggs, M. A., Douek, M., Hawkes, D. J. (2011). Large breast compressions: Observations and evaluation of simulations. MED PHYS38(2), 682-690 doi:10.1118/1.3525837.

Tarvainen, T., Kolehmainen, V., Arridge, S. R., Kaipio, J. P. (2011). Image reconstruction in diffuse optical tomography using the coupled radiative transport-diffusion model. J QUANT SPECTROSC RA112(16), 2600-2608 doi:10.1016/j.jqsrt.2011.07.008.

Tremoulheac, B., Batchelor, P. G., Menys, A., Atkinson, D. (2011). Decomposition of dynamic MR images with low-rank and sparse matrix separation. British Chapter of ISMRM.

Usman, M., Prieto, C., Odille, F., ATKINSON, D., Schaeffter, T., Batchelor, P. G. (2011). A computationally efficient OMP-based compressed sensing reconstruction for dynamic MRI. Physics in Medicine and Biology56(7), N99-N114 doi:10.1088/0031-9155/56/7/N02.

ZHANG, H., Dyrby, T. B., Alexander, D. C. (2011). Axon diameter mapping in crossing fibers with diffusion MRI. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011.

ZHANG, H., Hubbard, P. L., Parker, G. J. M., Alexander, D. C. (2011). Axon diameter mapping in the presence of orientation dispersion with diffusion MRI. Proceedings of the organization for human brain mapping.

Zhang, H., Dyrby, T. B., Alexander, D. C. (2011). Axon diameter mapping in crossing fibers with diffusion MRI. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)6892 LNCS(PART 2), 82-89

Zhuang, X., Arridge, S., Hawkes, D. J., Ourselin, S. (2011). A Nonrigid Registration Framework Using Spatially Encoded Mutual Information and Free-Form Deformations. IEEE Trans Med Imaging30(10), 1819-1828 doi:10.1109/TMI.2011.2150240.

2010

Alexander, D. C., Hubbard, P. L., Hall, M. G., Moore, E. A., Ptito, M., Parker, G. J., Dyrby, T. B. (2010). Orientationally invariant indices of axon diameter and density from diffusion MRI. Neuroimage52(4), 1374-1389 doi:10.1016/j.neuroimage.2010.05.043.

Alexander, D. C., Seunarine, K. K. (2010). Mathematics of Crossing Fibres. In Jones, D. K. (Ed.). Diffusion MRI ( ). Oxford University Press, USA.

Allain, B., Hu, M., Lovat, L. B., Cook, R. J., Vercauteren, T., Ourselin, S., Hawkes, D. J. (2010). A System for Biopsy Site Re-targeting with Uncertainty in Gastroenterology and Oropharyngeal Examinations. Med Image Comput Comput Assist Interv. ( Vol. 13 pp.514-521).

Amati, C., Brostow, G. J. (2010). Modeling 2.5D Plants from Ink Paintings. SBM. ( pp.41-48). Eurographics Association. Publisher URL

Ballan, L., Brostow, G. J., Puwein, J., Pollefeys, M. (2010). Unstructured Video-Based Rendering: Interactive Exploration of Casually Captured Videos. ACM TRANSACTIONS ON GRAPHICS29(4), 87 doi:10.1145/1778765.1778824. Author URL

Chen, B., Siow, B., Carmichael, D., Odille, F., Ordidge, R., Todd-Pokropek, A. (2010). Characterization of trabecular orientation in chicken femur by multi-directional SPENT (Sub-Pixel Enhancement of Non-Uniform Tissue). ISMRM. ( pp.793-).

Clarkson, M. J., Malone, I. B., Modat, M., Leung, K. K., Ryan, N., Alexander, D. C., Fox, N. C., Ourselin, S. (2010). A Framework for Using Diffusion Weighted Imaging to Improve Cortical Parcellation. Med Image Comput Comput Assist Interv. ( Vol. 13 pp.534-541).

Crosier, M., Griffin, L. D. (2010). Using Basic Image Features for Texture Classification. INT J COMPUT VISION88(3), 447-460 doi:10.1007/s11263-009-0315-0.

Drobnjak, I., Siow, B., Alexander, D. (2010). Optimizing gradient waveforms for microstructure sensitivity in diffusion-weighted MR. Journal of Magnetic Resonance Publisher URL

Dyrby, T. B., Hubbard, P. L., Ptito, M., Hall, M. G., Alexander, D. C. (2010). Dependence of Axon Diameter Index on Maximum Gradient Strength. International Society for Magnetic Resonance in Medicine. ( pp.576-576). ISMRM.

Griffin, L. D., Lillholm, M. (2010). Symmetry Sensitivities of Derivative-of-Gaussian Filters. IEEE T PATTERN ANAL32(6), 1072-1083 doi:10.1109/TPAMI.2009.91.

Han, L., Hipwell, J. H., Taylor, Z. A., Tanner, C., Ourselin, S., Hawkes, D. J. (2010). Fast Deformation Simulation of Breasts Using GPU-Based Dynamic Explicit Finite Element Method. Digital Mammography / IWDM. ( Vol. 6136 pp.728-735). Springer. Publisher URL

Jafar, Y. M., Hipwell, J. H., Tanner, C., Hawkes, D. J. (2010). Detection of Stable Mammographic Features under Compression using Simulated Mammograms. MEDICAL IMAGING 2010: IMAGE PROCESSING. ( Vol. 7623 ). SPIE-INT SOC OPTICAL ENGINEERING.

Kezele, I., Alexander, D. C., Batchelor, P. G., Mangin, J. -. F., Le Bihan, D., Poupon, C. (2010). Measuring Microstructural Features Related to Neuronal Activation Using Diffusion MRI and Three-Compartment Diffusion Models: A Feasibility Study. International Society for Magnetic Resonance in Medicine 18th Annual Scientific Meeting and Exhibition: 2010 Proceedings. ( pp.1580-1580). Berkeley, US: International Society for Magnetic Resonance in Medicine.

Kezele, I., Batchelor, P. G., Poupon, C., Mangin, J. -. F., Le Bihan, D., Alexander, D. C. (2010). Feasibility of Measuring Microstructural Features of Systems with Intermediate Exchange and Sub-Cellular Compartmentalization Using Diffusion MRI. International Society for Magnetic Resonance in Medicine. ( pp.301-301). ISMRM.

Kleinnijenhuis, M., Barth, M., Alexander, D. C., Van Cappellen Van Walsum, A. -. M., Norris, D. G. (2010). SWI-Informed Diffusion Tensor Tractography. International Society for Magnetic Resonance in Medicine. ( pp.4021-4021). ISMRM.

Lehtikangas, O., Tarvainen, T., Kolehmainen, V., Pulkkinen, A., Arridge, S. R., Kaipio, J. P. (2010). Finite element approximation of the Fokker-Planck equation for diffuse optical tomography. J QUANT SPECTROSC RA111(10), 1406-1417 doi:10.1016/j.jqsrt.2010.03.003.

Mac Aodha, O., Brostow, G. J., Pollefeys, M. (2010). Segmenting Video Into Classes of Algorithm-Suitability. CVPR. ( pp.1054-1061). IEEE. Author URL Publisher URL

Melbourne, A., Hawkes, D. J., Atkinson, D. (2010). DATA DRIVEN GROUPWISE REGISTRATION OF DIFFUSION WEIGHTED IMAGES. ISBI 2010. ( pp.1299-).

Melbourne, A., Hawkes, D. J., Atkinson, D. (2010). DATA DRIVEN GROUPWISE REGISTRATION OF DIFFUSION WEIGHTED IMAGES. ISBI. ( pp.352-355). IEEE. Publisher URL

Melbourne, A., Hipwell, J. H., Hawkes, D. J. (2010). The Effect of Motion Correction on Pharmacokinetic Parameter Estimation. Digital Mammography / IWDM. ( Vol. 6136 pp.744-751). Springer. Publisher URL

Melbourne, A., Ridgway, G., Hawkes, D. J. (2010). Image Similarity Metrics in Image Registration. Proceedings of SPIE Medical Imaging.

Mertzanidou, T., Hipwell, J. H., Cardoso, M. J., Tanner, C., Ourselin, S., Hawkes, D. J. (2010). X-ray Mammography - MRI Registration Using a Volume-Preserving Affine Transformation and an EM-MRF for Breast Tissue Classification. Digital Mammography / IWDM. ( Vol. 6136 pp.23-30). Springer. Publisher URL

Mertzanidou, T., Hipwell, J. H., Tanner, C., Hawkes, D. J. (2010). An intensity-based approach to X-ray mammography - MRI registration. MEDICAL IMAGING 2010: IMAGE PROCESSING. ( Vol. 7623 ). SPIE-INT SOC OPTICAL ENGINEERING.

Modat, M., Ridgway, G. R., Hawkes, D. J., Fox, N. C., Ourselin, S. (2010). NONRIGID REGISTRATION WITH DIFFERENTIAL BIAS CORRECTION USING NORMALISED MUTUAL INFORMATION. Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on. ( pp.356-359). Publisher URL

Modat, M., Ridgway, G. R., Taylor, Z. A., Lehmann, M., Barnes, J., Hawkes, D. J., Fox, N. C., Ourselin, S. (2010). Fast free-form deformation using graphics processing units. Comput Methods Programs Biomed98(3), 278-284 doi:10.1016/j.cmpb.2009.09.002.

Modat, M., Taylor, Z., Ridgway, G., Barnes, J., Wild, E., Hawkes, D. J., Fox, N., Ourselin, S. (2010). Nonlinear Elastic Spline Registration: Evaluation with Longitudinal Huntington's Disease Data. LNCS. ( pp.128-139). Publisher URL

Moore, A. P., Prince, S. J. D., Warrell, J. (2010). "Lattice Cut" - Constructing superpixels using layer constraints. CVPR. ( pp.2117-2124). IEEE. Publisher URL

Morgan, G. L., Newbould, R. D., Whitcher, B., Alexander, D. C. (2010). Polynomial models of the spatial variation of axon radius in white matter. Proceedings of the international society for magnetic resonance in medicine. ( Vol. 18 pp.1564-1564). Stockholm, Sweden:

Morgan, G. L., Zhang, H., Whitcher, B., Alexander, D. C. (2010). A spatial variation model of white matter microstructure. Proceedings of the Workshop on Computational Diffusion MRI (CDMRI'10), Medical Image Computing and Computer-Assisted Intervention (MICCAI 2010). ( pp.165-174). Publisher URL

Muir, J., Arancibia-Carcamo, I. L., MacAskill, A. F., Smith, K. R., Griffin, L. D., Kittler, J. T. (2010). NMDA receptors regulate GABA(A) receptor lateral mobility and clustering at inhibitory synapses through serine 327 on the gamma 2 subunit. Proc Natl Acad Sci U S A107(38), 16679-16684 doi:10.1073/pnas.1000589107.

Newell, A. J., Griffin, L. D., Morgan, R. M., Bull, P. A. (2010). Texture-based estimation of physical characteristics of sand grains. Proceedings: 2010 Digital Image Computing: Techniques and Applications: DICTA 2010 1-3 December 2010, Sydney, Australia. ( pp.504-509). Piscataway, US: IEEE Computer Society. Publisher URL

Odille, F., Batchelor, P. G., Prieto, C., Schaeffter, T., Atkinson, D. (2010). A parallel computing framework for motion-compensated reconstruction based on the motion point-spread function. ISMRM. ( pp.498-).

Odille, F., Batchelor, P. G., Prieto, C., Schaeffter, T., Atkinson, D. (2010). On the accuracy of nonrigid motion correction. ISMRM Workshop on Motion Correction, Kitzbuhel, Austria.

Odille, F., Steeden, J., Muthurangu, V., Atkinson, D. (2010). Nonrigid registration based segmentation for the analysis of real-time cardiac flow images. ISMRM. ( pp.5076-).

Odille, F., Uribe, S., Batchelor, P. G., Prieto, C., Schaeffter, T., Atkinson, D. (2010). Model-Based Reconstruction for Cardiac Cine MRI Without ECG or Breath Holding. MAGN RESON MED63(5), 1247-1257 doi:10.1002/mrm.22312.

Panagiotaki, E., Hall, M. G., Siow, B., Lythgoe, M. F., Alexander, D. C. (2010). Three-dimensional models of tissue microstructure for simulating high-precision diffusion MRI data. Proceedings of the 18th meeting of the International society for magnetic resonance in medicine, Stockholm, Sweden (2010).

Panagiotaki, E., Hall, M. G., Zhang, H., Siow, B., Lythgoe, M. F., Alexander, D. C. (2010). High-fidelity meshes from tissue samples for diffusion MRI simulations. Med Image Comput Comput Assist Interv. ( Vol. 13 pp.404-411).

Pereira, S. M. P., Hipwell, J. H., McCormack, V. A., Tanner, C., Moss, S. M., Wilkinson, L. S., Khoo, L. A. L., Pagliari, C., Skippage, P. L., Kliger, C. J., Hawkes, D. J., Silva, I. M. D. (2010). Automated registration of diagnostic to prediagnostic x-ray mammograms: Evaluation and comparison to radiologists' accuracy. MED PHYS37(9), 4530-4539 doi:10.1118/1.3457470.

Prevost, R., Buckley, D. L., Alexander, D. C. (2010). Optimization of the DCE-CT protocol using active imaging. Proceedings of the 2010 7th IEEE International Symposium On Biomedical Imaging: From Nano to Macro: April 14 – 17, 2010 Congress Center “De Doelen” Rotterdam, The Netherlands. ( pp.776-779). Piscataway, US: IEEE.

Prieto, C., Knowles, B. R., Usman, M., Batchelor, P. G., Odille, F., Atkinson, D., Schaeffter, T. (2010). Autocalibrated approach for the combination of compressed sensing and SENSE. ISMRM. ( pp.4862-).

Prieto, C., Uribe, S., Razavi, R., Atkinson, D., Schaeffter, T. (2010). 3D Undersampled Golden-Radial Phase Encoding for DCE-MRA Using Inherently Regularized Iterative SENSE. Magnetic Resonance in Medicine64(2), 514-526 doi:10.1002/mrm.22446.

Roth, H., McClelland, J., Boone, D., Hu, M., Ourselin, S., Slabaugh, G., Halligan, S., Hawkes, D., Medicsight, P. L. C. (2010). Conformal Mapping of the Inner Colon Surface to a Cylinder for the Application of Prone to Supine Registration. Medical Image Understanding and Analysis (MIUA).

Roth, H., McClelland, J., Modat, M., Boone, D., Hu, M., Ourselin, S., Slabaugh, G., Halligan, S., Hawkes, D. (2010). Establishing Spatial Correspondence between the Inner Colon Surfaces from Prone and Supine CT Colonography. Med Image Comput Comput Assist Interv. ( Vol. 13 pp.497-504).

Rudge, T. J., Soloviev, V., Arridge, S. R. (2010). Fast image reconstruction in fluoresence optical tomography using data compression. Optics Letters35(5), 763-766 doi:10.1364/OL.35.000763.

SIOW, B., Carmichael, D. W., Riegler, J., Alexander, D. A., Lythgoe, M. F., Ordidge, R. (2010). Detection of Human Mononuclear Cells Labelled with Micron-Sized Iron Oxide Particles Using the Sub-Pixel Enhancement of Nonuniform Tissue (SPENT) Sequence. 18th meeting of the International Society for Magnetic Resonance in Medicine.

Schneider, T., Alexander, D. C., Wheeler-Kingshott, C. A. M. (2010). Optimized diffusion MRI protocols for estimating axon diameter with known fibre orientation. Proc. Intl. Soc. Mag. Reson. Med. ( Vol. 18 pp.1561-).

Schneider, T., Wheeler-Kingshott, C. A., Alexander, D. C. (2010). In-Vivo Estimates of Axonal Characteristics Using Optimized Diffusion MRI Protocols for Single Fibre Orientation. Med Image Comput Comput Assist Interv. ( Vol. 13 pp.623-630).

Schweiger, M., Dorn, O., Zacharopoulos, A., Nissila, I., Arridge, S. R. (2010). 3D level set reconstruction of model and experimental data in Diffuse Optical Tomography. OPT EXPRESS18(1), 150-164

Sherbondy, A. J., Rowe, M. C., Alexander, D. C. (2010). MicroTrack: an algorithm for concurrent projectome and microstructure estimation. Med Image Comput Comput Assist Interv13(Pt 1), 183-190

Soloviev, V. Y., D'Andrea, C., Mohan, P. S., Valentini, G., Cubeddu, R., Arridge, S. R. (2010). Fluorescence lifetime optical tomography with Discontinuous Galerkin discretisation scheme. BIOMEDICAL OPTICS EXPRESS1 Author URL

Soloviev, V. Y., McGinty, J., Tahir, K. B., Laine, R., Stuckey, D. W., Mohan, P. S., Hajnal, J. V., Sardini, A., French, P. M. W., Arridge, S. R. (2010). Tomographic imaging of Fluorescence Resonance Energy Transfer in highly light scattering media. BIOMEDICAL APPLICATIONS OF LIGHT SCATTERING IV. ( Vol. 7573 ). SPIE-INT SOC OPTICAL ENGINEERING.

Sorensen, T. S., Prieto, C., Atkinson, D., Hansen, M. S., Schaeffter, T. (2010). GPU accelerated iterative SENSE reconstruction of radial phase encoded whole-heart MRI. ISMRM. ( pp.2869-).

Steeden, J. A., Atkinson, D., Taylor, A. M., Muthurangu, V. (2010). Assessing the hemodynamic response to exercise - A novel MR approach. Journal of Cardiovascular Magnetic Resonance. ( Vol. 12(Suppl 1) pp.O67-).

Steeden, J. A., Atkinson, D., Taylor, A. M., Muthurangu, V. (2010). Assessing vascular response to exercise using a combination of real-time spiral phase contrast MR and noninvasive blood pressure measurements. JOURNAL OF MAGNETIC RESONANCE IMAGING31(4), 997-1003 doi:10.1002/jmri.22105.

Steeden, J. A., Atkinson, D., Taylor, A. M., Muthurangu, V. (2010). Novel hybrid real-time phase-contrast sequence. ISMRM. ( pp.71-).

Steeden, J. A., Atkinson, D., Taylor, A. M., Muthurangu, V. (2010). Split-Acquisition Real-Time CINE Phase-Contrast MR Flow Measurements. Magn Reson Med64(6), 1664-1670 doi:10.1002/mrm.22615.

Sutcliffe, A. G., Akindolie, O., Griffin, L. D., Baker, A. (2010). AN OBJECTIVE METHOD TO QUANTIFY STOOL COLOUR IN NEONATAL CHOLESTASIS. 43rd Ann Mtg Eur Soc Paed Gastro

Sweet, A., Alexander, D. C. (2010). Reduced Encoding Persistent Angular Structure. International Society for Magnetic Resonance in Medicine. ( pp.572-572). ISMRM.

TARVAINEN, T., Kolehmainen, V., Kaipio, J. P., Arridge, S. R. (2010). Corrections to linear methods for diffuse optical tomography using approximation error modelling. Biomedical Optics Express1(1), 209-222 doi:10.1364/BOE.1.000209.

Tarvainen, T., Kolehmainen, V., Pulkkinen, A., Vauhkonen, M., Schweiger, M., Arridge, S. R., Kaipio, J. P. (2010). An approximation error approach for compensating for modelling errors between the radiative transfer equation and the diffusion approximation in diffuse optical tomography. Inverse Problems26, 015005- doi:10.1088/0266-5611/26/1/015005.

Vuissoz, P. A., Odille, F., Fernandez, B., Lohezic, M., Benhadid, A., Mandry, D., Felblinger, J. (2010). Analysis of cardio-respiratory motion of the heart Using GRICS (first insights). ISMRM. ( pp.3601-).

Wells, J. C. K., Griffin, L., Treleaven, P. (2010). Independent Changes in Female Body Shape with Parity and Age: A Life-History Approach to Female Adiposity. AM J HUM BIOL22(4), 456-462 doi:10.1002/ajhb.21017.

Wheeler-Kingshott, C. A. M., Ciccarelli, O., Schneider, T., Alexander, D. C., Cercignani, M. (2010). A new approach to structural integrity assessment based on axial and radial diffusivities. Proc. Intl. Soc. Mag. Reson. Med. ( Vol. 18 pp.1568-1568).

Yang, G., Hipwell, J. H., Clarkson, M. J., Tanner, C., Mertzanidou, T., Gunn, S., Ourselin, S., Hawkes, D. J., Arridge, S. R. (2010). Combined Reconstruction and Registration of Digital Breast Tomosynthesis. Digital Mammography / IWDM. ( Vol. 6136 pp.760-768). Springer. Publisher URL

Yogarajah, M., Focke, N. K., Bonelli, S. B., Thompson, P., Vollmar, C., McEvoy, A. W., Alexander, D. C., Symms, M. R., Koepp, M. J., Duncan, J. S. (2010). The structural plasticity of white matter networks following anterior temporal lobe resection. Brain133(Pt 8), 2348-2364 doi:10.1093/brain/awq175.

Zhang, H., Alexander, D. C. (2010). Axon diameter mapping in the presence of orientation dispersion with diffusion MRI. Med Image Comput Comput Assist Interv13(Pt 1), 640-647

Zhuang, X., Hawkes, D. J., Ourselin, S. (2010). Spatial Information Encoded Mutual Information for Nonrigid Registration. WBIR. ( Vol. 6204 pp.246-257). Springer. Publisher URL

Zhuang, X., Rhode, K. S., Razavi, R. S., Hawkes, D. J., Ourselin, S. (2010). A Registration-Based Propagation Framework for Automatic Whole Heart Segmentation of Cardiac MRI. IEEE Trans Med Imaging29(9), 1612-1625 doi:10.1109/TMI.2010.2047112.

2009

Aghajanian, J., Prince, S. J. D. (2009). Face pose estimation in uncontrolled environments. Proceedings of The British Machine Vision Conference (BMVC) 2009. Malvern, UK: The British Machine Vision Association and Society for Pattern Recognition. Publisher URL

Aghajanian, J., Warrell, J., Prince, S. J., Li, P., Rohn, J., Baum, B. (2009). Patch-based Within-Object Classification. IEEE International Conference on Computer Vision. Author URL

Alexander, D. C. (2009). Modelling, Fitting and Sampling in Diffusion MRI. In Laidlaw, D., Weickert, J. (Eds.). Visualization and Processing of Tensor Fields ( pp.3-20). Springer Verlag.

Alexander, D. C., Hubbard, P. L., Hall, M. G., Moore, E. A., Ptito, M., Parker, G. J. M., Dyrby, T. B. (2009). Orientationally invariant axon-size and density weighted MRI. International Society for Magnetic Resonance in Medicine (ISMRM). ( pp.357-).

Allain, B., Hu, M. X., Lovat, L. B., Ourselin, S., Cook, R., Hawkes, D. J. (2009). Biopsy Site Re-localisation Based on the Computation of Epipolar Lines from Two Previous Endoscopic Images. MICCAI. ( Vol. 5761 pp.491-498). Heidelberg: Springer.

Arridge, S. R., Schotland, J. C. (2009). Optical tomography: forward and inverse problems. INVERSE PROBL25(12), 123010 doi:10.1088/0266-5611/25/12/123010.

Bassi, A., D'Andrea, C., Valentini, G., Cubeddu, R., Arridge, S. R. (2009). Detection of inhomogeneities in diffusive media using spatially modulated light. Optics Letters34, 2156-2158

Boubertakh, R., Prieto, C., Batchelor, P., Uribe, S., Atkinson, D., Eggers, H., Sorensen, T., Hansen, M., Rezavi, R., Schaeffter, (2009). Whole-Heart Imaging Using Undersampled Radial Phase Encoding (RPE) and Iterative Sensitivity Encoding (SENSE) Reconstruction. Magnetic Resonance in Medicine62(5), 1331-1337 doi:10.1002/mrm.22102. Author URL

Brostow, G. J., Fauqueur, J., Cipolla, R. (2009). Semantic object classes in video: A high-definition ground truth database. PATTERN RECOGN LETT30(2), 88-97 doi:10.1016/j.patrec.2008.04.005. Author URL

Chinchapatnam, P., Ginks, M., Sermesant, M., Rhode, K., Arridge, S., Lambiase, P., Bostock, J., Rinaldi, C. A., Razavi, R. (2009). A novel method of estimating electrical recruitability of myocardial tissue using an electrophysiological model. Circulation, AHA Sessions.

Chinchapatnam, P., Rhode, K. S., Ginks, M., Nair, P. B., Razavi, R., Arridge, S. R., Sermesant, M. (2009). Voxel Based Adaptive Meshless Method for Cardiac Electrophysiology Simulation. FIMH. ( Vol. 5528 pp.182-190). Springer. Publisher URL

Choe, R., Konecky, S. D., Corlu, A., Lee, K., Durduran, T., Busch, D. R., Pathak, S., Czerniecki, B. J., Tchou, J., Fraker, D. L., DeMichele, A., Chance, B., Arridge, S. R., Schweiger, M., Culver, J. P., Schnall, M. D., Putt, M. E., Rosen, M. A., Yodh, A. G. (2009). Differentiation of benign and malignant breast tumors by in-vivo three-dimensional parallel-plate diffuse optical tomography. J BIOMED OPT14(2), 024020 doi:10.1117/1.3103325.

Choe, R., Konecky, S. D., Corlu, A., Lee, K., Durduran, T., Busch, D., Pathak, S., Czerniecki, B. J., Tchou, J., Fraker, D. L., DeMichele, A., Chance, B., Arridge, S. R., Schweiger, M. J., Schnall, M. D., Putt, M. E., Rosen, M. A., Yodh, A. G. (2009). Differentiation of Benign and Malignant Breast Tumor by in-vivo Parallel-Plate Diffuse Optical Tomography. Journal of Biomedical Optics14(2)

Clarkson, M. J., Ourselin, S., Nielsen, C., Leung, K. K., Barnes, J., Whitwell, J. L., Gunter, J. L., Hill, D. L. G., Weiner, M. W., Jack, C. R., Fox, N. C., The, A. D. N. I. (2009). Comparison of phantom and registration scaling corrections using the ADNI cohort. NeuroImage47(4), 1506-1513 doi:10.1016/j.neuroimage.2009.05.045. Author URL

Clayden, J. D., Nagy, Z., Alexander, D. C., Clark, C. A. (2009). Axon radius estimation using optimised Stejskal-Tanner and dual spin echo sequences at modest SNR. International society for magnetic resonance in medicine (ISMRM). ( pp.1397-).

Clayden, J. D., Nagy, Z., Hall, M. G., Clark, C. A., Alexander, D. C. (2009). Active Imaging with Dual Spin-Echo Diffusion MRI. ( Vol. 21 pp.264-275).

Clayden, J. D., Nagy, Z., Hall, M. G., Clark, C. A., Alexander, D. C. (2009). Active imaging with dual spin-echo diffusion MRI. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)5636 LNCS, 264-275

Cox, B. T., Arridge, S. R., Beard, P. C. (2009). Estimating chromophore distributions from multiwavelength photoacoustic images. Journal of the Optical Society of America26(2), 443-445

Dyrby, T. B., Baare, W. F. C., Alexander, D. C., Jelsing, J., Garde, E., Sogaard, L. V. (2009). Longitudinal changes in diffusivity after long-term storage of postmortem tissue. International society for magnetic resonance in medicine (ISMRM). ( pp.1416-).

Edgar, J., Muthurangu, V., Taylor, A., Atkinson, D. (2009). Undersampled Spirals for Real-time Flow Measurements. ISMRM 2009. ( pp.1855-).

Fonteijn, H. M., Hall, M. G., Alexander, D. C. (2009). A study on the validity of the tortuosity approximation for extracellular diffusion using monte-carlo simulations. International society for magnetic resonance in medicine (ISMRM). ( pp.1361-).

Fu, Y., Prince, S. (2009). Investigating the spatial support of signal and noise in face recognition. 2009 IEEE 12th International Conference on Computer Vision Workshops (ICCV Workshops). ( pp.131-138). Los Alamitos, US: IEEE Computer Society. Author URL Publisher URL

Griffin, L. D. (2009). Symmetries of 2-D Images: Cases without Periodic Translations. J MATH IMAGING VIS34(3), 259-269 doi:10.1007/s10851-009-0148-z.

Griffin, L. D., Lillholm, M., Crosier, M., van Sande, J. (2009). Basic Image Features (BIFs) Arising from Approximate Symmetry Type. SCALE SPACE AND VARIATIONAL METHODS IN COMPUTER VISION, PROCEEDINGS. ( Vol. 5567 pp.343-355). SPRINGER-VERLAG BERLIN.

Hall, M. G., Alexander, D. C. (2009). Convergence and Parameter Choice for Monte-Carlo Simulations of Diffusion MRI. IEEE Transactions on Medical Imaging28(9), 1354-1364

Haroon, H. A., Morris, D. M., Embleton, K. V., Alexander, D. C., Parker, G. J. M. (2009). Using the Model-Based Residual Bootstrap to Quantify Uncertainty in Fiber Orientations From Q-Ball Analysis. IEEE T MED IMAGING28(4), 535-550 doi:10.1109/TMI.2008.2006528.

Hiltunen, P., Arridge, S., Prince, S. (2009). A combined reconstruction-classification method for diffuse optical tomography. Physics in Medicine and Biology54, 6457-6476 Author URL

Hu, M. X., Penney, G. P., Rueckert, D., Edwards, P. J., Bello, F., Casula, R., Figl, M., Hawkes, D. J. (2009). Non-rigid Reconstruction of the Beating Heart Surface for Minimally Invasive Cardiac Surgery. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2009, PT I, PROCEEDINGS. ( Vol. 5761 pp.34-42). SPRINGER-VERLAG BERLIN.

King, A. P., Boubertakh, R., Rhode, K. S., Ma, Y. L., Chinchapatnam, P., Gao, G., Tangcharoen, T., Ginks, M., Cooklin, M., Gill, J. S., Hawkes, D. J., Razavi, R. S., Schaeffter, T. (2009). A subject-specific technique for respiratory motion correction in image-guided cardiac catheterisation procedures. MED IMAGE ANAL13(3), 419-431 doi:10.1016/j.media.2009.01.003.

Kolehmainen, V., Schweiger, M., Nissila, I., Tarvainen, T., Arridge, S. R., Kaipio, J. P. (2009). Approximation errors and model reduction in three-dimensional diffuse optical tomography. Journal of the Optical Society of the America A26(10), 2257-2267 doi:10.1364/JOSAA.26.002257.

Li, P., Prince, S. (2009). Joint and Implicit Registration for Face Recognition. IEEE Computer Vision and Pattern Recognition. Author URL

Lillholm, M., Griffin, L. D. (2009). Statistics and category systems for the shape index descriptor of local 2nd order natural image structure. IMAGE VISION COMPUT27(6), 771-781 doi:10.1016/j.imavis.2008.08.003.

McGinty, J., Soloviev, V. Y., Tahir, K. B., Laine, R., Stuckey, D. W., Hajnal, J. V., Sardini, A., French, P. M. W., Arridge, S. R. (2009). Three-dimensional imaging of Forster resonance energy transfer in heterogeneous turbid media by tomographic fluorescent lifetime imaging. Optics Letters34(17), 2772-2774

Melbourne, A., Collins, D. J., Leach, M. O., Koh, D. -. M., Hawkes, D. J., Atkinson, D. (2009). Contrast Enhanced Image Registration using Kullbach-Leibler Assisted Image Matching and Patching (KLAMP). ISMRM 2009. ( pp.4223-).

Melbourne, A., Hawkes, D. J., Atkinson, D. (2009). IMAGE REGISTRATION USING UNCERTAINTY COEFFICIENTS. ISBI 2009. ( pp.951-954).

Melbourne, A., Orton, M., Collins, D. J., Koh, D. -. M., Leach, M. O., Hawkes, D. J., Atkinson, D. (2009). The effect of image registration on pharmacokinetic parameter extraction using 3D DCE-MRI. ISMRM 2009. ( pp.4216-).

Miyazaki, K., Orton, M. R., Koh, D. -. M., Lewington, V., Atkinson, D., Hawkes, D. J., Leach, M. O., Collins, D. J. (2009). Evaluation of slope-based hepatic perfusion index quantification methods against dual-input kinetic model based approach. ISMRM 2009. ( pp.4215-).

Miyazaki, K., Orton, M. R., Lewington, V., Atkinson, D., Hawkes, D. J., Leach, M. O., Collins, D. J. (2009). Hepatic perfusion quantification using a dual-input kinetic model with a novel portal venous estimation method: Evaluation against other model- and slope-based perfusion quantification approaches. ISMRM 2009. ( pp.4222-).

Mohammed, U., Prince, S., Kautz, J. (2009). Visio-lization: Generating Novel Facial Images. ACM Transations on Graphics (Proc. SIGGRAPH). ( Vol. 23 pp.294-302).

Moore, A., Prince, S., Warrell, J., Mohammed, U., Jones, G. (2009). Scene Shape Priors for Superpixel Segmentation. IEEE International Conference on Computer Vision. Author URL

Nagy, Z., Alexander, D. C., Weiskopf, N. (2009). Measuring and correcting errors that occur in diffusion weighted images due to non-ideal gradient linearity. International Society for Magnetic Resonance in Medicine 17th Annual Scientific Meeting and Exhibition: 2009 Proceedings. ( pp.1377-1377). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Nedjati-Gilani, S., Alexander, D. C. (2009). Fanning and bending sub-voxel structures in diffusion MRI. International society for magnetic resonance in medicine (ISMRM). ( pp.1402-).

Odille, F., Uribe, S., Schaeffter, T., Atkinson, D. (2009). Cardiac and respiratory motion compensated reconstruction driven only by 1D navigators. ISMRM 2009. ( pp.4644-).

Orton, M. R., Miyazaki, K., Koh, D. -. M., Collins, D. J., Atkinson, D., Hawkes, D. J., Leach, M. O. (2009). Novel method of portal delay and dispersion estimation for dual-input kinetic modelling of DCE-MRI liver data. ISMRM 2009. ( pp.3615-).

Orton, M. R., Miyazaki, K., Koh, D. -. M., Collins, D. J., Atkinson, D., Hawkes, D. J., Leach, M. O. (2009). Onset estimation for dual input DCE-MRI liver data : information criteria used to determine statistical optimality of global or pixel-wise onset estimation. ISMRM 2009. ( pp.3614-).

Orton, M. R., Miyazaki, K., Koh, D. -. M., Collins, D. J., Hawkes, D. J., Atkinson, D., Leach, M. O. (2009). Optimizing functional parameter accuracy for breath-hold DCE-MRI of liver tumours. Physics in Medicine and Biology54(7), 2197-2215 doi:10.1088/0031-9155/54/7/023. Author URL

Panagiotaki, E., Fonteijn, H. M., Nedjati-Gilani, S., Hall, M. G., Alexander, D. C. (2009). Exploring analytic models of the diffusion MR signal in fixed rat brain tissue. Proceedings of the 17th meeting of the International society for magnetic resonance in medicine, Hawaii, USA (2009).

Panagiotaki, E., Fonteijn, H., Siow, B., Hall, M. G., Price, A., Lythgoe, M. F., Alexander, D. C. (2009). Two-Compartment Models of the Diffusion MR Signal in Brain White Matter. Medical Image Computing and Computer Assisted Intervention (MICCAI). ( Vol. 1 pp.329-336). London: Springer.

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Prieto, C., Uribe, S., Batchelor, P., Irarrazaval, P., Razavi, R., Atkinson, D., Schaeffter, T. (2009). 3D Undersampled Golden-Radial Phase Encoding Using Iterative Reconstructions and Inherent Regularization. ISMRM. ( pp.763-).

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McGinty, J., Tahir, K. B., Soloviev, V. Y., Laine, R., Sardini, A., Talbot, C. B., Dunsby, C., Munro, I., Elson, D. S., Hajnal, J. V., Neil, M. A. A., Arridge, S. R., French, P. M. W. (2008). Time-Domain Fluorescence Lifetime Tomography. Biomedical Optics, BIOMED. St. Petersburg, Florida, USA: Optical Society of America (OSA).

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Miyazaki, K., Collins, D. J., Koh, D. -. M., Atkinson, D., Hawkes, D. J., Leach, M. O. (2008). Evaluation of quantitative dynamic contrast enhanced pharmacokinetic parameters with and without postprocessing. ISMRM. ( pp.3734-).

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Orton, M. R., Collins, D. J., Hawkes, D. J., Atkinson, D., Leach, M. O. (2008). Effect of Image Acquisition Protocol on Vascular Parameter Estimates from DCE-MRI Liver Data. ISMRM. ( pp.1894-).

Orton, M. R., Collins, D. J., Walker-Samuel, S., d'Arcy, J. A., Hawkes, D. J., Atkinson, D., Leach, M. O. (2008). Bayesian estimation of pharmacokinetic parametersfor DCE-MRI with a robust treatment of enhancement onset time. Physics in Medicine and Biology52(9), 2393-2408 doi:10.1088/0031-9155/52/9/005.

Orton, M. R., d'Arcy, J. A., Collins, D. J., Atkinson, D., Hawkes, D. J., Leach, M. O. (2008). Portal Delay Estimation from DCE-MRI Liver Tissue Data: Feasibility and Effect on Vascular Parameter Estimates. ISMRM. ( pp.1709-).

Orton, M. R., d'Arcy, J. A., Walker-Samuel, S., Hawkes, D. J., Atkinson, D., Collins, D. J., Leach, M. O. (2008). Computationally efficient vascular input function models for quantitative kinetic modelling using DCE-MRI. Physics in Medicine and Biology53(5), 1225-1239 doi:10.1088/0031-9155/53/5/005. Author URL

Padormo, F., Nunes, R. G., Atkinson, D., Batchelor, P. G., Hajnal, J. V., Larkman, D. J. (2008). An Approach to Coil Calibration Based on Prior Training Data. ISMRM. ( pp.1277-).

Palm, C., Penney, G. P., Crum, W. R., Schnabel, J. A., Pietrzyk, U., Hawkes, D. J. (2008). Fusion of rat brain histology and MRI using weighted multi-image mutual information - art. no. 69140M. MEDICAL IMAGING 2008: IMAGE PROCESSING, PTS 1-3. ( Vol. 6914 pp.M9140-M9140). SPIE-INT SOC OPTICAL ENGINEERING.

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Soloviev, V. Y., D'Andrea C, B. M., Valentini G, S., R B, C., R, A., S, R. (2008). Adjoint time domain method for fluorescent imaging in turbid media. Applied Optics47(13), 2303-2311 Author URL

Soloviev, V. Y., D'Andrea, C., Brambilla, M., Valentini, G., Cubeddu, R., Schulz, R. B., Arridge, S. R. (2008). 3-D Fluorescence Imaging in Turbid Media by Using Time Gated Data Acquisition. Biomedical Optics, BIOMED. St. Petersburg, Florida, USA: Optical Society of America (OSA).

Tarvainen, T., Vauhkonen, M., Arridge, S. R. (2008). Gauss-Newton reconstruction method for optical tomography using the finite element solution of the radiative transfer equation. Journal of Quantitative Spectroscopy and Radiative Transfer109(17-18), 2767-2778 doi:10.1016/j.jqsrt.2008.08.006.

Tarvainen, T., Vauhkonen, M., Kolehmainen, V., Kaipio, J. P., Arridge, S. R. (2008). Utilizing the radiative transfer equation in optical tomography. PIERS 2008 CAMBRIDGE, PROCEEDINGS. ( pp.730-735). ELECTROMAGNETICS ACAD.

Tarvainen, T., Vauhkonen, M., Kolehmainen, V., Kaipio, J. P., Arridge, S. R. (2008). Utilizing the radiative transfer equation in optical tomography. PIERS Online4(6), 655-660 doi:10.2529/PIERS071219142458.

Taylor, Z. A., Comas, O., Cheng, M., Passenger, J., Hawkes, D. J., Atkinson, D., Ourselin, S. (2008). Modelling Anisotropic Viscoelasticity for Real-Time Soft Tissue Simulation. LNCS. ( Vol. 5241 pp.703-710). New York:

Thompson, S. A., Penney, G. P., Hawkes, D. J., Dasgupta, P. (2008). Bone segmentation using a CT based statistical shape model for image guidance in robot assisted prostatectomy. BJU INTERNATIONAL. ( Vol. 101 pp.40-40). BLACKWELL PUBLISHING.

Thompson, S., Penney, G., Buie, D., Dasgupta, P., Hawkes, D. (2008). Use of a CT statistical deformation model for multi-modal pelvic bone segmentation. SPIE Medical Imaging 2008: Image Processing.. Author URL

Waechter, I., Barratt, D. C., Hawkes, D. J., Bredno, J., Weese, J. (2008). Quantifying blood flow division at bifurcations from rotational angiography. 5th IEEE International Symposium on Biomedical Imaging.

Waechter, I., Bredno, J., Hermans, R., Barratt, D., Weese, J., Hawkes, D. (2008). Evaluation of model-based blood flow quantification from rotational angiography. SPIE Medical Imaging.

Waechter, I., Bredno, J., Hermans, R., Weese, J., Barratt, D. C., Hawkes, D. J. (2008). Evaluation of model-based blood flow quantification from rotational angiography - art. no. 691606. MEDICAL IMAGING 2008: PHYSIOLOGY, FUNCTION, AND STRUCTURE FROM MEDICAL IMAGES. ( Vol. 6916 pp.91606-91606). SPIE-INT SOC OPTICAL ENGINEERING.

Waechter, I., Bredno, J., Hermans, R., Weese, J., Barratt, D. C., Hawkes, D. J. (2008). Model-based blood flow quantification from rotational angiography. Med Image Anal12(5), 586-602 doi:10.1016/j.media.2008.06.003.

Waechter, I., Bredno, J., Weese, J., Barratt, D. C., Hawkes, D. J. (2008). Using flow information to support 3D vessel reconstruction from rotational angiography. Med Phys35(7), 3302-3316

White, M. J., Atkinson, D., Charles-Edwards, L., Coolens, C., Hawkins, M., Miyazaki, K., Collins, D., Leach, M. O., Hawkes, D. J. (2008). Image Deformation Recovery using Overlapping Partial Samples (iDROPS): model-based respiratory artefact correction in free-breathing liver MRI. ISMRM. ( pp.3117-).

Yogarajah, M., Powell, H. W. R., Parker, G. J. M., Alexander, D. C., Thompson, P. J., Symms, M. R., Boulby, P., Wheeler-Kingshott, C. A., Barker, G. J., Koepp, M. J., Duncan, J. S. (2008). Tractography of the parahippocampal gyrus and material specific memory impairment in unilateral temporal lobe epilepsy. NeuroImage40(4), 1755-1764 doi:10.1016/j.neuroimage.2007.12.046. Author URL

Yogarajah, M.Yogarajah, M., Focke, N., Cercignani, M., Acheson, J., Bonelli, S. B., Parker, G., Alexander, D., Symms, M., Koepp, M., Duncan, J. S. (2008). TRACING MEYER'S LOOP: TEMPORAL LOBE RESECTION, VISUAL FIELD DEFICITS, AND TRACTOGRAPHY. EPILEPSIA. ( Vol. 49 pp.485-486). BLACKWELL PUBLISHING.

Zacharopoulos, A., Dorn, O., Arridge, S. R., Kolehmainen, V., Sikora, J. (2008). Reconstruction of simple geometric objects in 3D optical tomography using an adjoint technique and a boundary element method. PROGRESS IN INDUSTRIAL MATHEMATICS AT ECMI 2006. ( Vol. 12 pp.603-607). SPRINGER-VERLAG BERLIN.

Zhuang, X., Hawkes, D. J., Crum, W. R., Boubertakh, R., Uribe, S., Atkinson, D., Batchelor, P. (2008). Robust registration between cardiac MRI images and atlas for segmentation propagation. SPIE Medical Imaging. ( Vol. 6914 pp.7-).

Zhuang, X., Hawkes, D. J., Crum, W. R., Boubertakh, R., Uribe, S., Atkinson, D., Batchelor, P., Schaeffter, T., Razavi, R., Hill, D. L. G. (2008). Robust Registration between Cardiac MRI Images and Atlas for Segmentation Propagation. Proceedings of SPIE Vol. 6914 Medical Imaging 2008: Image Processing. ( Vol. 6914 pp.07-).

Zhuang, X., Hawkes, D. J., Crum, W. R., Boubertakh, R., Uribe, S., Atkinson, D., Batchelor, P., Schaeffter, T., Razavi, R., Hill, D. L. G. (2008). Robust registration between cardiac MRI images and atlas for segmentation propagation - art. no. 691408. MEDICAL IMAGING 2008: IMAGE PROCESSING, PTS 1-3. ( Vol. 6914 pp.91408-91408). SPIE-INT SOC OPTICAL ENGINEERING.

Zhuang, X., Rhode, K., Arridge, S., Razavi, R., Hill, D., Hawkes, D. J., Ourselin, S. (2008). An Atlas-Based Segmentation Propagation Framework Using Locally Affine Registration - Application to Automatic Whole Heart Segmentation. Medical Image Computing and Computer-Assisted Intervention – MICCAI 2008. ( Vol. 5242 pp.425-433). Springer. Author URL

Zografos, V., Buxton, B. F. (2008). A Bayesian approach to 3D object recognition using linear combination of 2D views. VISAPP 2008: PROCEEDINGS OF THE THIRD INTERNATIONAL CONFERENCE ON COMPUTER VISION THEORY AND APPLICATIONS, VOL 2. ( pp.295-298). INSTICC-INST SYST TECHNOLOGIES INFORMATION CONTROL & COMMUNICATION.

2007

Abascal, J. F. P. J., Arridge, S. R., Lionheart, W. R. B., Bayford, R. H., Holder, D. S. (2007). Validation of a finite element solution for electrical impedance tomography in an anisotropic medium. 13TH INTERNATIONAL CONFERENCE ON ELECTRICAL BIOIMPEDANCE AND THE 8TH CONFERENCE ON ELECTRICAL IMPEDANCE TOMOGRAPHY 2007. ( Vol. 17 pp.372-375). SPRINGER.

Abascal, J. F. P. J., Arridge, S. R., Lionheart, W. R. B., Bayford, R. H., Holder, D. S. (2007). Validation of a finite-element solution for electrical impedance tomography in an anisotropic medium. PHYSIOLOGICAL MEASUREMENT. ( Vol. 28 pp.S129-S140). IOP PUBLISHING LTD.

Alexander, D. C. (2007). Axon radius measurements in vivo from diffusion MRI: A feasibility study. Eleventh IEEE International Conference on Computer Vision, Rio de Janeiro, Brazil, October 14-20 2007 (ICCV2007): IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis 2007 (MMBIA 2007). ( pp.1-8). Los Alamitos, US: IEEE Computer Society Press. Author URL Publisher URL

Alexander, D. C., Hall, M. G. (2007). Making the most of synthetic data: modelling vs simulation. SNDS bi-national workshop on MRI of brain connectivity and microstructure: measuremennt and validation.

Alexander, D. C., Jiang, T., Westin, C. -. F. (2007). Guest editorial special issue on computational diffusion MRI. IEEE Transactions on Medical Imaging26(11), 1425-1426

Alexander, D. C., Jiang, T., Westin, C. F. (2007). Special issue on computational diffusion MRI. IEEE T MED IMAGING26(11), 1425-1427 doi:10.1109/TMI.2007.909944.

Alexander, D. C., Jones, D. K. (2007). Limits on measuring axon diameters in vivo using diffusion MRI. International Society for Magnetic Resonance in Medicine 15th Annual Scientific Meeting and Exhibition: 2007 Proceedings. ( pp.1541-1541). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Atkinson, D., Batchelor, P. G., Clark, C. (2007). Track Ribbons - Visualising Structural Information in Diffusion Tensor Axial Asymmetry. Proc ISMRM. ( pp.79-). Author URL

Batchelor, P., Atkinson, D., Schaeffter T, R., R, (2007). A fast Principal Direction Imaging method from Diffusion Weighted Images. ISMRM. ( pp.3516-).

Chinchapatnam, P., Rhode, K. S., King, A. P., Gao, G., Ma, Y., Schaeffter, T., Hawkes, D. J., Razavi, R., Hill, D. L. G., Arridge, S. R., Sermesant, M. (2007). Anisotropic wave propagation and apparent conductivity estimation in a fast electrophysiological model: Application to XMR interventional imaging. Lecture Notes in Computer Science. ( Vol. 4791 pp.575-581). Springer. Author URL

Cook, P. A., Boulby, P. A., Symms, M. R., Alexander, D. C. (2007). Optimal acquisition orders of diffusion-weighted MRI measurements. Journal of Magnetic Resonance Imaging25(5), 1051-1058 Author URL

Corlu, A., Choe, R., Durduran, T., Rosen, M. A., Schweiger, M., Arridge, S. R., Schnall, M. D., Yodh, A. G. (2007). Three-dimensional in vivo fluorescence diffuse optical tomography of breast cancer in humans. Optics Express15(11), 6696-6716

Cox, B. T., Arridge, S. R., Beard, P. C. (2007). Gradient-based quantitative photoacoustic image reconstruction for molecular imaging - art. no. 64371T. Photons Plus Ultrasound: Imaging and Sensing 2007. ( Vol. 6437 pp.T4371-T4371). SPIE-INT SOC OPTICAL ENGINEERING.

Cox, B. T., Arridge, S. R., Beard, P. C. (2007). Photoacoustic tomography with a limited-aperture planar sensor and a reverberant cavity. Inverse Problems23, S95-S112 doi:10.1088/0266-5611/23/6/S08.

Cox, B. T., Kara, S., Arridge, S. R., Beard, P. C. (2007). k-space propagation models for acoustically heterogeneous media: Application to biomedical photoacoustics. Journal of the Acoustical Society of America121(6), 3453-3464 doi:10.1121/1.2717409.

Crosier, M., Griffin, L. D. (2007). Zipf's law distribution of local structure in natural images. Perception. ( Vol. 36 pp.303-303).

Crum, W. R., Camara, O., Hawkes, D. J. (2007). Methods for inverting dense displacement fields: Evaluation in brain image registration. Med Image Comput Comput Assist Interv10(Pt 1), 900-907

Douiri, A., Schweiger, M., Riley, J., Arridge, S. R. (2007). Anisotropic diffusion regularization methods for diffuse optical tomography using edge prior information. MEASUREMENT SCIENCE & TECHNOLOGY. ( Vol. 18 pp.87-95). IOP PUBLISHING LTD.

Dyrby, T. B., Sogaard, L. V., Parker, G. J. M., Alexander, D. C., Lind, N. M., Baare, W. F. C., Hay-Schmidt, A., Eriksen, N., Pakkenberg, B., Paulson, O. B., Jelsing, J. (2007). Validation of in vitro probabilistic tractography. NeuroImage37(4), 1267-1277 doi:10.1016/j.neuroimage.2007.06.022. Author URL

Elder, J., Prince, S., Hou, Y., Sizintsev, M., Olevskiy, E. (2007). Pre-attentive and attentive detection of humans in wide-field scenes. International Journal of Computer Vision72(1), 47-66 doi:10.1007/s11263-006-8892-7. Author URL

Enfield, L. C., Gibson, A. P., Everdell, N. L., Delpy, D. T., Schweiger, M., Arridge, S. R., Richardson, C., Keshtgar, M., Douek, M., Hebden, J. C. (2007). Three-dimensional time-resolved optical mammography of the uncompressed breast. Applied Optics46(17), 3628-3638 Author URL

Fauqueur, J., Brostow, G. J., Cipolla, R. (2007). Assisted video object labeling by joint tracking of regions and keypoints. ICCV. ( pp.1-7). IEEE. Publisher URL

Griffin, L. D. (2007). The second order local-image-structure solid. IEEE Transactions on Pattern Analysis and Machine Intelligence29(8), 1355-1366 doi:10.1109/TPAMI.2007.1066. Author URL

Griffin, L. D., Lillholm, M. (2007). Feature category systems for 2nd order local image structure induced by natural image statistics and otherwise. HUMAN VISION AND ELECTRONIC IMAGING XII. ( Vol. 6492 pp.49209-49209). SPIE-INT SOC OPTICAL ENGINEERING.

Griffin, L. D., Lillholm, M. (2007). Feature category systems for 2nd order local image structure induced by natural image statistics and otherwise. Human Vision and Electronic Imaging XII. ( Vol. 6492 pp.49209-49209). SPIE.

Hall, M. G., Alexander, D. C. (2007). Covalidation of a Monte-Carlo and an analytical model of diffusion for synthetic diffusion-weighted MR data. SNDS bi-national workshop on MRI of brain connectivity and microstructure: measurement and validation.

Hawkes, D. J., Penney, G. P., Atkinson, D., Barratt, D., Blackall, J., Carter, T., Crum, B., McClelland J, T., C, T., S, W., M, J. (2007). Motion and Biomechanical Models for Image-Guided Interventions. 4TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING : MACRO TO NANO. ( pp.992-995).

Hernandez, C., Vogiatzis, G., Brostow, G. J., Stenger, B., Cipolla, R. (2007). Non-rigid photometric stereo with colored lights. 2007 IEEE 11TH INTERNATIONAL CONFERENCE ON COMPUTER VISION, VOLS 1-6. ( pp.873-880). IEEE.

Hipwell, J. H., Tanner, C., Crum, W. R., Schnabel, J. A., Hawkes, D. J. (2007). A new validation method for x-ray mammogram registration algorithms using a projection model of breast x-ray compression. IEEE Transactions on Medical Imaging26(7), 1190-1200 Author URL

Horesh, L., Bollhofer, M., Schweiger, M., Arridge, S. R., Holder, D. S. (2007). Novel Large-Scale 3D Electrical Impedance Tomography Modeling of the Human Head. WORLD CONGRESS ON MEDICAL PHYSICS AND BIOMEDICAL ENGINEERING 2006, VOL 14, PTS 1-6. ( Vol. 14 pp.3858-3861). SPRINGER-VERLAG BERLIN.

Horesh, L., Schweiger, M., Arridge, S. R., Holder, D. S. (2007). Large-Scale Non-Linear 3D Reconstruction Algorithms for Electrical Impedance Tomography of the Human Head. WORLD CONGRESS ON MEDICAL PHYSICS AND BIOMEDICAL ENGINEERING 2006, VOL 14, PTS 1-6. ( Vol. 14 pp.3862-3865). SPRINGER-VERLAG BERLIN.

Hulme, D. J., Hirsch, R., Buxton, B. F., Lotto, R. B. (2007). A new reduction from 3SAT to n-partite graphs. IEEE Conference Proceedings. ( pp.235-238).

Jiang, Q., Alexander, D. C., Ding, G. L., Zhang, Z. G., Pourabdollah, S., Nejad, D., Zhang, L., Li, L., Hu, J., Bagherebadian, H., Ewing, J. R., Chopp, M. (2007). White matter reorganization after stroke measured by Gaussian DTI, q-ball, and PAS MRI. International Society for Magnetic Resonance in Medicine 15th Annual Scientific Meeting and Exhibition: 2007 Proceedings. ( pp.66-66). Berkeley, US: International Society for Magnetic Resonance in. Publisher URL

Johnson, M., Brostow, G. J., Shotton, J., Kwatra, V., Cipolla, R. (2007). Semantic photo synthesis. HUMAN VISION AND ELECTRONIC IMAGING XII. ( Vol. 6492 pp.X4920-X4920). SPIE-INT SOC OPTICAL ENGINEERING.

Larsen, L., Griffin, L. D., Grassel, D., Witte, O. W., Axer, H. (2007). Polarized light imaging of white matter architecture. Microscopy Research and Technique70(10), 851-863 doi:10.1002/jemt.20488.

Lillholm, M., Griffin, L. D. (2007). Maximum likelihood metameres for local 2nd order image structure of natural images. Scale Space and Variational Methods in Computer Vision: First International Conference, SSVM 2007, Ischia, Italy, May 30 - June 2, 2007: Proceedings. ( Vol. 4485 pp.394-405). Berlin/Heidelberg, Germany: Springer-Verlag. Publisher URL

McClelland, J. R., Webb, S., McQuaid, D., Binnie, D. M., Hawkes, D. J. (2007). Tracking 'differential organ motion' with a 'breathing' multileaf collimator: magnitude of problem assessed using 4D CT data and a motion-compensation strategy. PHYS MED BIOL52(16), 4805-4826 doi:10.1088/0031-9155/52/16/007.

Melbourne, A., Atkinson, D., White, M. J., Collins, M., Leach, M., Hawkes, D. (2007). Registration of dynamic contrast-enhanced MRI using a progressive principal component registration (PPCR). Physics in Medicine and Biology52(17), 5147-5156 doi:10.1088/0031-9155/52/17/003. Author URL

Melbourne, A., Atkinson, D., White, M. J., Hawkes, D. J., Collins, D., Leach, M. (2007). Contrast-enhancement simulation using principal components for registration of Dynamic Contrast-Enhanced MRI. ISMRM. ( pp.522-).

Melbourne, A., Atkinson, D., White, M. J., Hawkes, D. J., Collins, D., Leach, M. (2007). Using Registration to Quantify the Consistency of Whole Liver Position during Patient Breath-hold in Dynamic Contrast-Enhanced MRI. Proc ISMRM. ( pp.3709-).

Miyazaki, K., d'Arcy, J. A., Atkinson, D., Hawkes, D., Koh, D. -. M., Leach, M. O., Collins, D. J. (2007). Correcting Artifacts in High Temporal- and Spatial-Resolution Dynamic Abdominal Studies Using UNFOLD: A Potential Tool for Improving Perfusion Quantification of DCE-MR Investigations. ISMRM. ( pp.3421-).

Mohammed, U., Prince, S., Kautz, J. (2007). Stochastic generation of realistic image content. 4'th European Conference on Visual Media Production.

Nagy, Z., Weiskopf, N., Alexander, D. C., Deichmann, R. (2007). A method for improving the performance of gradient systems for diffusion-weighted MRI. Magnetic Resonance in Medicine58(4), 763-768 doi:10.1002/mrm.21379. Author URL

Nasrallah, A., Griffin, L. D. (2007). Gradient direction dependencies in natural images. Spatial Vision20(3), 277-299 Author URL

Nedjati-Gilani, S., Parker, G. J., Alexander, D. C. (2007). Sub-voxel reconstruction of fibre orientations. Medical Image Understanding and Analysis (MIUA). ( pp.186-190).

Nedjati-Gilani, S., Parker, G. J., Hall, M. G., Alexander, D. C. (2007). . International Society for Megnetic Resonance in Medicine (ISMRM) - British Chapter. ( pp.45-).

Nunes, R. G., Hajnal, J. V., Atkinson, D., Larkman, D. J. (2007). Can Relative Coil-Subject Motion During Acquisition Improve Parallel Imaging? ISMRM. ( pp.3340-).

Orton, M. R., Collins, D. J., Walker-Samuel, S., d'Arcy, J. A., Hawkes, D. J., Atkinson, D., Leach, M. O. (2007). Bayesian estimation of pharmacokinetic parameters for DCE-MRI with a robust treatment of enhancement onset time. Phys Med Biol52(9), 2393-2408 doi:10.1088/0031-9155/52/9/005.

Orton, M. R., Collins, D. J., Walker-Samuel, S., d'Arcy, J. A., Hawkes, D. J., Atkinson, D., Leach, M. O. (2007). Bayesian estimation of pharmacokinetic parametersfor DCE-MRI with a robust treatment of enhancement onset time. Physics in Medicine and Biology52(9), 2379-2391 doi:10.1088/0031-9155/52/9/004. Author URL

Penney, G. P., Edwards, P. J., Hipwell, J. H., Slomczykowski, M., Revie, I., Hawkes, D. J. (2007). Postoperative calculation of acetabular cup position using 2-D-3-D registration. IEEE T BIO-MED ENG54(7), 1342-1348 doi:10.1109/TBME.2007.890737.

Pourabdollah-Nejad, S., Bagher-Ebadian, H., Jiang, Q., Noll, D. C., Alexander, D. C., Ewing, J. R., Jafari-Khouzani, K., Chopp, M. (2007). Information extraction from ischemic stroke MR images using independent component analysis technique. International Society for Magnetic Resonance in Medicine 15th Annual Scientific Meeting and Exhibition: 2007 Proceedings. ( pp.2275-2275). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Powell, H. W. R., Parker, G. J. M., Alexander, D. C., Symms, M. R., Wheeler-Kingshott, C. A. M., Boulby, P. A., Barker, G. J., Koepp, M. J., Duncan, J. S. (2007). Abnormalities of language networks in temporal lobe epilepsy. JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY. ( Vol. 78 pp.215-215). B M J PUBLISHING GROUP.

Powell, H. W., Parker, G. J. M., Alexander, D. C., Symms, M. R., Boulby, P. A., Wheeler-Kingshott, C. A. M., Barker, G. J., Koepp, M. J., Duncan, J. S. (2007). Abnormalities of language networks in temporal lobe epilepsy. NeuroImage36(1), 209-221 doi:10.1016/j.neuroimage.2007.02.028. Author URL

Prince, S. J. D., Elder, J. H. (2007). Probabilistic linear discriminant analysis for inferences about identity. 2007 IEEE 11TH INTERNATIONAL CONFERENCE ON COMPUTER VISION, VOLS 1-6. ( pp.1751-1758). IEEE.

Prince, S., Aghajanian, J., Mohammed, U., Sahani, M. (2007). Latent identity variables: Biometric matching without explicit identity estimation. Lecture Notes in Computer Science. ( Vol. 4642 pp.424-434). Berlin/Heidelberg: Springer. Author URL

Prince, S., Arridge, S. (2007). Estimating spatial and temporal factors in optical diffusion tomography. Applied Inverse Problems.

Prince, S., Elder, J. (2007). Probabilistic Linear Discriminant Analysis for Inferences About Identity. International Conference in Computer Vision (ICCV 2007). ( pp.1-8). Author URL

Robson, S., Buxton, B. F., Clark, A. (2007). Close Range Colour Artefact Scanning. Proceedings of the 2007 Annual Conference of the Remote Sensing and Photogrammetry Society (RSPSoc 2007). Newcastle, UK: Remote Sensing and Photogrammetry Society. Author URL

Schweiger, M., Nissila, I., Boas, D. A., Arridge, S. R. (2007). Image reconstruction in optical tomography in the presence of coupling errors. APPL OPTICS46(14), 2743-2756

Senanayake, C. R., Alexander, D. C. (2007). Colour transfer by feature based histogram registration. Proceedings of the British Machine Vision Conference 2007. Malvern, UK: British Machine Vision Association. Publisher URL

Seunarine, K. K., Cook, P. A., Hall, M. G., Embleton K, P., G J, A., D, C. (2007). Exploiting Peak anisotropy for tracking through complex structures. IEEE computer society workshop on Mathematical methods in medical image analysis.

Seunarine, K. K., Cook, P. A., Hall, M. G., Embleton, K. V., Parker, G. J. M., Alexander, D. C. (2007). Exploiting peak anisotropy for tracking through complex structures. IEEE ICCV Workshop on MMBIA.

Seunarine, K. K., Cook, P. A., Hall, M. G., Embleton, K. V., Parker, G. J. M., Alexander, D. C. (2007). Exploiting peak anisotropy for tracking through fanning structures. Proc ISMRM. ( pp.901-).

Seunarine, K. K., Cook, P. A., Hall, M. G., Embleton, K., Parker, G. J., Alexander, D. C. (2007). Validation of generalised PICo tractography using bootstrap measurements. SNDS bi-national woprkshop on brain connectivity and microstructure: measurement and validation.

Shepherd, T., Alexander, D. C. (2007). Supervised MS Lesion Segmentation. Medical Image Understanding and Analysis. ( pp.191-195).

Silva, L. A. L., Buxton, B. F., Campbell, J. A. (2007). Enhanced Case-Based Reasoning through Use of Argumentation and Numerical Taxonomy. Proceedings of the twentieth International Florida Artificial Intelligence Research Society Conference. ( pp.423-428). Menlo Park, US: AAAI Press. Publisher URL

Soloviev, V. Y., McGinty, J., Tahir, K. B., Neil, M. A. A., Sardini, A., Hajnal, J. V., Arridge, S. R., French, P. M. W. (2007). Fluorescence lifetime tomography of live cells expressing enhanced green fluorescent protein embedded in a scattering medium exhibiting background autofluorescence. Optics Letters32(14), 2034-2036 doi:10.1364/OL.32.002034. Author URL

Soloviev, V. Y., Tahir, K. B., McGinty, J., Elson, D. S., Neil, M. A. A., French, P. M. W., Arridge, S. R. (2007). Fluorescence lifetime imaging by using time-gated data acquisition. Applied Optics46(30), 7384-7391 doi:10.1364/AO.46.007384. Author URL

Soloviev, V. Y., Tahir, K. B., McGinty, J., Elson, D. S., Nel, M. A. A., Sardini, A., Hajnal, J. V., Arridge, S. R., French, P. M. W. (2007). Fluorescence lifetime imaging through turbid media reconstructed in the Fourier domain using time-gated imaging data - art. no. 66291V. Progress In Biomedical Optics and Imaging. ( Vol. 6629 ). Munich, Germany: SPIE.

Tanner, C., Schnabel, J. A., Degenhard, A., Hall-Craggs, M. A., Usiskin, S. I., Leach, M. O., Hose, D. R., Hill, D. L. G., Hawkes, D. J. (2007). Quantitative evaluation of free-form deformation registration for dynamic contrast-enhanced MR mammography. Medical Physics34(4), 1221-1233 Author URL

Waechter, I., Bredno, J., Barratt, D., Weese, J., Hawkes, D. (2007). Quantification of blood flow from rotational angiography. MICCAI.

White, M. J., Atkinson, D., Batchelor, P. G., Crum, W. R., Uribe, S., Schaeffter, T., Collins, D. J., Leach, M. O., Hawkes, D. J. (2007). Reducing Artefacts by Inverting the Effects of Non-Rigid Motion During a Free-Breathing Liver Scan. ISMRM. ( pp.3430-).

White, M. J., Atkinson, D., Crum, W. R., Uribe, S., Schaeffler, T., Collins, D., Leach, M. O., Hawkes, D. J. (2007). Reducing artefacts by inverting the effects of non-rigid motion during a free-breathing liver scan. Int. Soc. Magnetic Resonance Med..

Wright, S., Schweiger, M., Arridge, S. R. (2007). Reconstruction in optical tomography using the P(N) approximations. MEASUREMENT SCIENCE & TECHNOLOGY. ( Vol. 18 pp.79-86). IOP PUBLISHING LTD.

Xie, Y., Griffin, L. D. (2007). A 'portholes' experiment for probing perception of small patches of natural images. Perception. ( Vol. 36 pp.315-315).

Yogarajah, M., Powell, H. W. R., Parker, G. J. M., Alexander, D. C., Symms, M. R., Boulby, P., Wheeler-Kingshott, C. A., Barker, C. J., Koepp, M. J., Duncan, J. S. (2007). Atrophy of medial temporal lobe connections in unilateral temporal lobe epilepsy: A tractography based study. JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY. ( Vol. 78 pp.1033-1033). B M J PUBLISHING GROUP.

Yogarajah, M., Powell, R., Parker, G., Alexander, D., Symms, M., Boulby, P., Wheeler-Kingshott, C., Barker, G., Thompson, P., Koepp, M., Duncan, J. (2007). Tractography of the parahippocampal gyrus and material specific memory impairment in unilateral temporal lobe epilepsy. EPILEPSIA. ( Vol. 48 pp.135-135). BLACKWELL PUBLISHING.

2006

Alexander, D. C. (2006). An introduction to computational diffusion MRI: the diffusion tensor and beyond. In Weichert, J., Hagen, H. (Eds.). Visualization and image processing of tensor fields ( pp.83-106). Berlin / Heidelberg:Springer.

Arridge, S. R., Kaipio, J. P., Kolehmainen, V., Schweiger, M., Somersalo, E., Tarvainen, T., Vauhkonen, M. (2006). Approximation errors and model reduction with an application in optical diffusion tomography. Inverse Problems22, 175-195 doi:10.1088/0266-5611/22/1/010. Author URL

Arridge, S., Dorn, O., Kaipio, J. P., Kolehmainen, V., Schweiger, M., Tarvainen, T., Vauhkonen, M., Zacharopoulos, A. (2006). Reconstruction of subdomain boundaries of piecewise constant coefficients of the radiative transfer equation from optical tomography data. Inverse Problems22(6), 2175-2`98

Atkinson, D. (2006). Incoherent artefact correction using PPI. NMR in Biomedicine19(3), 362-367 doi:10.1002/nbm.1045. Author URL

Atkinson, D. (2006). Special Applications of Parallel Imaging. In Schoenberg, S. O., Dietrich, O., Reiser, M. F. (Eds.). Parallel imaging in clinical MR applications (1 ed. pp.63-70). Springer.

Atkinson, D., Counsell, S., Hajnal, J. V., Batchelor, P. G., Hill, D. L. G., Larkman, D. J. (2006). Nonlinear phase correction of navigated multi-coil diffusion images. Magnetic Resonance in Medicine56(5), 1135-1139 doi:10.1002/mrm.21046.

Atkinson, D., Counsell, S., Hajnal, J., Larkman, D. J., Batchelor, P. G., Hill, D. L. G. (2006). Navigated Multi-Shot EPI Diffusion Imaging of the Spine. ISMRM. ( pp.1038-).

Atkinson, D., Counsell, S., Hajnal, J., Larkman, D. J., Batchelor, P. G., Hill, D. L. G. (2006). Navigated Multi-Shot EPI Diffusion Imaging of the Spine. Proceedings of the ISMRM. ( pp.1038-).

Austin, T., Gibson, A. P., Branco, G., Yusof, R., Arridge, S. R., Meek, J. H., Wyatt, J. S., Delpy, D. T., Hebden, J. C. (2006). Three dimensional optical imaging of blood volume and oxygenation in the neonatal brain. Neuroimage31(4), 1426-1433 Author URL

Austin, T., Gibson, A. P., Everdell, N. L., Schweiger, M., Arridge, S. R., Meek, J. H., Wyatt, J. S., Hebden, J. C. (2006). Optical imaging of the neonatal brain. Neonatal Society. London:

Austin, T., Hebden, J. C., Gibson, A. P., Branco, G., Yusof, R., Arridge, S. R., Meek, J. H., Delpy, D. T., Wyatt, J. S. (2006). Three dimensional optical imaging of blood volume and oxygenation in the neonatal brain. Neuroimage31, 1426-1433 doi:10.1016/j.neuroimage.2006.02.038.

Bai, Y., Alexander, D. C. (2006). Correcting for Motion between Acquisitions in Diffusion MR Imaging. Medical Image Understanding and Analysis (MIUA).

Bai, Y., Cook, P. A., Zhang, H., Alexander, D. C. (2006). Motion Correction in Diffusion Magnetic Resonance. Proceedings of the international society for magnetic resonance in medicine.

Barratt, D. C., Penney, G. P., Chan, C. S. K., Slomczykowski, M., Carter, T. J., Edwards, P. J., Hawkes, D. J. (2006). Self-calibrating 3D-ultrasound-based bone registration for minimally invasive orthopedic surgery. IEEE Transactions on Medical Imaging25(3), 312-323 doi:10.1109/TMI.2005.862736. Author URL

Barratt, D. C., Penney, G. P., Slomczykowski, M., Hawkes, D. J. (2006). Recent Developments in Ultrasound-based Bone Registration. Computer Assisted Orthopaedic Surgery: 6th Annual Meeting of CAOS International. ( pp.22-24).

Barratt, D. C., Penney, G. P., Slomczykowski, M., Hawkes, D. J. (2006). Ultrasound-based registration for minimally-invasive orthopaedic surgery. Presentations by Britain's Top Younger Scientists, Engineers and Technologists at The House of Commons.

Batchelor, P. G., Atkinson, D., Larkman, D. J., Hajnal, J. V. (2006). Corrections and reconstruction via conjugate gradientmethods, comparison of matrix and functional methods. ESMRMB.

Batchelor, P. G., Atkinson, D., Larkman, D. J., Hajnal, J., Hill, D. L. G., Irrarazaval, P., Hansen, M. (2006). A Sparse Matrix Formalism for Non-Rigid Motion Correction. Proceedings of the ISMRM. ( pp.3205-).

Batchelor, P. G., Calamante, F., Tournier, J. -. D., Atkinson, D., Hill, D. L., Connelly, A. (2006). Quantification of the shape of fiber tracts. MAGN RESON MED55(4), 894-903 doi:10.1002/mrm.20858.

Batchelor, P., Calamante, F., Atkinson, D., Hill, D. L. G., Tournier, D., Connelly, A. (2006). Advances in Fiber Tracking Quantification. Proceedings of the ISMRM. ( pp.3171-).

Batchelor, P., Calamante, F., Atkinson, D., Hill, D. L. G., Tournier, D., Connelly, A. (2006). Higher Order Tensor Analysis and Higher Order SVD for Diffusion Tensor Analysis. Proceedings of the ISMRM. ( pp.3172-).

Blackall, J. M., Ahmad, S., Miquel, M. E., McClelland, J. R., Landau, D. B., Hawkes, D. J. (2006). MRI-based measurements of respiratory motion variability and assessment of imaging strategies for radiotherapy planning. PHYS MED BIOL51(17), 4147-4169 doi:10.1088/0031-9155/51/17/003.

Blackall, J., Ahmad, S., Miquel, M., McClelland, J., Landau, D., Hawkes, D. (2006). MRI-Based Measurements of Respiratory Motion Variability and Assessment of Imaging Strategies for Radiotherapy Planning. Physics in Medicine and Biology51(17), 4147-4169 Author URL

Brostow, G. J., Cipolla, R. (2006). Unsupervised Bayesian Detection of Independent Motion in Crowds. CVPR (1). ( pp.594-601). IEEE Computer Society. Author URL Publisher URL

Camara, O., Schweiger, M., Scahill, R. I., Crum, W. R., Sneller, B. I., Schnabel, J. A., Ridgway, G. R., Cash, D. M., Hill, D. L. G., Fox, N. C. (2006). Phenomenological model of diffuse global and regional atrophy using finite-element methods. IEEE Transactions on Medical Imaging25(11), 1417-1430 doi:10.1109/TMI.2006.880588. Author URL

Carter, T. J., Tanner, C. C., W R, B. -. N., N, H., D, J. (2006). A framework for image-guided breast surgery. Medical Imaging and Augmented Reality -MIAR 2006. ( Vol. 4091 pp.203-210).

Carter, T. J., Tanner, C., Crum, W. R., Hawkes, D. J. (2006). Prone-Supine Breast MR Image Registration for Image-Guided Surgery. Medical Image Understanding and Analysis - MIUA 2006.

Cercignani, M., Alexander, D. C. (2006). Optimal acquisition schemes for in vivo quantitative magnetization transfer MRI. Magnetic Resonance in Medicine56(4), 803-810 doi:10.1002/mrm.21003. Author URL

Cercignani, M., Alexander, D. C. (2006). Optimal sampling for quantitative magnetization transfer. International Society for Magnetic Resonance in Medicine 14th Annual Scientific Meeting and Exhibition: 2006 Proceedings. ( pp.3498-3498). Berkeley, US: International Society for Magnetic Resonance in Medicine. Author URL Publisher URL

Cox, B. T., Arridge, S. R., Beard, P. C. (2006). Quantitative photoacoustic image reconstruction for molecular imaging - art. no. 60861M. Photons Plus Ultrasound: Imaging and Sensing 2006. ( Vol. 6086 pp.M861-M861). SPIE-INT SOC OPTICAL ENGINEERING.

Cox, B. T., Arridge, S. R., Beard, P. C. (2006). Quantitative photoacoustic image reconstruction for molecular imaging. Proceedings of SPIE. ( Vol. 6086 pp.60861M-).

Cox, B. T., Arridge, S. R., Kostli, K. P., Beard, P. C. (2006). 2D Quantitative photoacoustic image reconstruction of absorption distributions in scattering media using a simple recursive method. Applied Optics45(8), 1866-1875 doi:10.1364/AO.45.001866.

Cox, B. T., Arridge, S. R., Kostli, K. P., Beard, P. C. (2006). Two-dimensional quantitative photoacoustic image reconstruction of absorption distributions in scattering media by use of a simple iterative method. APPL OPTICS45(8), 1866-1875

Crum, W. R., Camara, O., Hill, D. L. G. (2006). Generalized overlap measures for evaluation and validation in medical image analysis. IEEE Transactions on Medical Imaging25(11), 1451-1461 doi:10.1109/TMI.2006.880587.

Diamond, S. G., Huppert, T. J., Kolehmainen, V., Franceschini, M. A., Kaipio, J. P., Arridge, S. R., Boas, D. A. (2006). Dynamic physiological modeling for functional diffuse optical tomography. NEUROIMAGE30(1), 88-101 doi:10.1016/j.neuroimage.2005.09.016.

Dyrby, T. B., Vejby, S. L., Parker, G. J. M., Alexander, D. C., Lind, N. M., Paulson, O. B., Jelsing, J. (2006). Validation of multi-fibre probabilistic tractography of corticothalamic projections in the Gottingen minipig brain. International Society for Magnetic Resonance in Medicine 14th Annual Scientific Meeting and Exhibition: 2006 Proceedings. ( pp.2740-2740). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Ebbels, T. M., Buxton, B. F., Jones, D. T. (2006). springScape: visualisation of microarray and contextual bioinformatic data using spring embedding and an 'information landscape'. Bioinformatics22(14), e99-e107 Author URL

Gee, J. C., Alexander, D. C. (2006). Diffusion tensor image registration. In Weichert, J., Hagen, H. (Eds.). Visualization and processing of tensor fields ( pp.327-344). Springer.

Gibson, A. P., Austin, T., Everdell, N. L., Schweiger, M., Arridge, S. R., Meek, J. H., Wyatt, J. S., Delpy, D. T., Hebden, J. C. (2006). Three-dimensional whole-head optical passive motor evoked responses in the tomography of neonate. NeuroImage30(2), 521-528 doi:10.1016/j.neuroimage.2005.08.059. Author URL

Gibson, A. P., Everdell, N. L., Hebden, J. C., Austin, T., Wong, F., Meek, J. H., Wyatt, J. S., Schweiger, M., Arridge, S. R. (2006). Anatomically constrained optical tomography of the neonatal brain. OSA Biomedical Topical Meeting. Miami:

Griffin, L. D. (2006). Natural images have a tendency towards purely 1-D local variation. Perception. ( Vol. 35 pp.415-416).

Griffin, L. D. (2006). Optimality of the basic colour categories for classification. Journal of the Royal Society Interface3(6), 71-85 doi:10.1098/rsif.2005.0076. Author URL

Griffin, L. D. (2006). The 2nd-order local-image-structure solid. Perception. ( Vol. 35 pp.57-57).

Griffin, L. D., Lillholm, M. (2006). Hypotheses for image features, icons and textons. INTERNATIONAL JOURNAL OF COMPUTER VISION. ( Vol. 70 pp.213-230). SPRINGER.

Griffin, L. D., Lillholm, M. (2006). Hypotheses for image features, icons and textons. International Journal of Computer Vision71(3), 213-230 doi:10.1007/s11263-006-6355-9. Author URL

Hall, M. G., Alexander, D. C. (2006). A simulation framework for diffusion MRI. Medical Image Understanding and Analysis. ( pp.26-30).

Hall, M. G., Alexander, D. C. (2006). Finite pulse widths improve fibre orientation estimates in diffusion tensor MRI. International Society for Magnetic Resonance in Medicine 14th Annual Scientific Meeting and Exhibition: 2006 Proceedings. ( pp.1076-1076). Berkeley, US: International Society for Magnetic Resonance. Publisher URL

Haroon, H. A., Lambon-Ralph, M. A., Watson, Y., Ciccarelli, O., Wheeler-Kingshott, C. A. M., Alexander, D. C., Luzzi, S., Parker, G. J. M. (2006). Auditory-language networks involving the superior temporal gyrus: patterns of connection and lateralization. Proc. Intl. Soc. Mag. Reson. Med. ( Vol. 14 pp.769-769). Author URL Publisher URL

Hipwell, J. H., Tanner, C., Crum, W. R., Hawkes, D. J. (2006). X-ray mammogram registration: A novel validation method. DIGITAL MAMMOGRAPHY, PROCEEDINGS. ( Vol. 4046 pp.197-204). SPRINGER-VERLAG BERLIN.

Hulme, O., Eickhoff, S., Prince, S., Chumbley, J., Friston, K., Shipp, S. (2006). Functional tensor imaging of attention in the pulvinar. Computational Systems Neuroscience.

Ioannides, A., Johnston, A. J., Griffin, L. D. (2006). Simultaneous contrast and white's effect as a consequence of a biologically plausible model of brightness filling-in [Abstract]. Journal of Vision6(6), 707a- doi:10.1167/6.6.707. Author URL

Ioannides, A., Johnston, A., Griffin, L. D. (2006). White's effect as a consequence of reconstruction from a biologically realistic brightness code. Perception. ( Vol. 35 pp.423-424).

Johnson, M., Brostow, G. J., Shotton, J., Arandjelovic, O., Kwatra, V., Cipolla, R. (2006). Semantic photo synthesis. COMPUTER GRAPHICS FORUM25(3), 407-413

Kolehmainen, V., Arridge, S. R., Kaipio, J. P., Schweiger, M., Somersalo, E., Tarvainen, T., Vauhkonen, M. (2006). Approximation errors and model reduction in optical tomography. 2006 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Vols 1-15. ( pp.5942-5945). IEEE.

Larkman, D. J., Batchelor, P. G., Atkinson, D., Rueckert, D., Hajnal, J. V. (2006). Beyond the g-factor limit in sensitivity encoding using joint histogram entropy. Magnetic Resonance in Medicine55(1), 153-160 doi:10.1002/mrm.20752. Author URL

Leung, K. K., Holden, M., Saeed, N., Brooks, K. J., Buckton, J. B., Williams, A. A., Campbell, S. P., Changani, K., Reid, D. G., Zhao, Y., Wilde, M., Rueckert, D., Hajnal, J. V., Hill, D. L. G. (2006). Automatic quantification of changes in bone in serial MR images of joints. IEEE Transactions on Medical Imaging Author URL

Leung, K. K., Saeed, N., Campbell, S. P., Changani, K., Hill, A. D. L. G. (2006). Spatio-temporal segmentation of rheumatoid arthritis lesions in serial MR images of joints. MMBIA 2006: IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis.

Leung, T. S., Tachtsidis, I., Elwell, C. E., Delpy, D. T., Tisdall, M., Smith, M., Arridge, S. (2006). Modelling of indocyanine green bolus with a finite element model of the adult human head and the Fick principle. Biomedical Optics, Technical Digest. ( pp.MC6-). US: Optical Society of America. Publisher URL

Lillholm, M., Griffin, L. D. (2006). A category system on the shape index descriptor of local image structure induced by natural image statistics. Perception. ( Vol. 35 pp.49-).

Lillholm, M., Griffin, L. D. (2006). A category system on the shape index descriptor of local image structure induced by natural image statistics. PERCEPTION35, 48-49

McClelland, J. R., Blackall, J. M., Tarte, S., Chandler, A. C., Hughes, S., Ahmad, S., Landau, D. B., Hawkes, D. J. (2006). A continuous 4D motion model from multiple respiratory cycles for use in lung radiotherapy. MED PHYS33(9), 3348-3358 doi:10.1118/1.2222079.

McClelland, J., Blackall, J., Tarte, S., Chandler, A., Hughes, S., Ahmad, S., Landau, D., Hawkes, D. (2006). A Continuous 4D Motion Model from Multiple Respiratory Cycles for use in Lung Radiotherapy. Medical Physics33(9), 3348-3358 doi:10.1118/1.2222079.

Miyazaki, K., Walker-Samual, S., Knowles, B. R., Taylor, N. J., Padhani, A. R., Wallace, T., Tang, A., White, M., Hawkes, D., Atkinson, D., Collins, D., Leach, M. O., Koh, D. M. (2006). Parametric DCE-MRI HPI Maps - A Qualitative and Quantitative Analysis in Phase I Clinical Trial Patients with Liver Metastases. Proceedings of the ISMRM, 2006.. ( pp.763-).

Nasrallah, A. J., Griffin, L. D. (2006). Multi-local statistics of gradients. PERCEPTION35(3), 426-426

Nasrallah, A., Griffin, L. D. (2006). Multi-local dependencies of gradient directions in natural images. Perception. ( Vol. 35 pp.57-57). Author URL

Nedjati-Gilani, S., Parker, G. J. M., Alexander, D. C. (2006). Mapping the number of fibre orientations per voxel in diffusion MRI. ISMRM 14th Scientific Meeting and Exhibition.

Newton, J. M., Ward, N. S., Parker, G. J., Deichmann, R., Alexander, D. C., Friston, K. J., Frackowiak, R. S. J. (2006). Non-invasive mapping of corticofugal fibres from multiple motor areas - relevance to stroke recovery. Brain129(7), 1844-1858 Author URL

Papastavrou, Y., Hutton, B., Hawkes, D. (2006). Non-rigid registration of combned PET-CT jhead and neck images to place the information within a common anatomical framework. Eur J Nucl Med Mol Imaging. ( Vol. 33 pp.S138-S138).

Penney, G. P., Barratt, B. C., Chan, C. S. K., Slomczykowski, M., Carter, T. J., Edwards, P. J., Hawkes, D. J. (2006). Cadaver validation of intensity-based ultrasound to CT registration. Medical Image Analysis10(3), 385-395 doi:10.1016/j.media.2006.01.003. Author URL

Pineda, A. R., Schweiger, M., Arridge, S. R., Barrett, H. H. (2006). Information content of data types in time-domain optical tomography. J OPT SOC AM A23(12), 2989-2996

Powell, H. W. R., Parker, G. J. M., Alexander, D. C., Symms, M. R., Boulby, P. A., Wheeler-Kingshott, C. A. M., Barker, G. J., Noppeney, U., Koepp, M. J., Duncan, J. S. (2006). Hemispheric asymmetries in language-related pathways: A combined functional MPI and tractography study. NeuroImage32(1), 388-399 Author URL

Powell, R., Parker, G., Alexander, D., Symms, M., Barker, G., Koepp, M., Duncan, J. (2006). Diffuse language pathway abnormalities in temporal lobe epilepsy. EPILEPSIA. ( Vol. 47 pp.149-149). BLACKWELL PUBLISHING.

Prince, S. J. D., Elder, J. H. (2006). Tied Factor Analysis for Face Recognition Across Large Pose Changes. Proceedings of the British Machine Vision Conference 2006. ( Vol. 3 pp.889-898). Malvern, UK: British Machine Vision Association. Publisher URL

Prince, S., Elder, J., Hou, Y., Sizinstev, M., Olevskiy, E. (2006). Towards face recognition at a distance. Institution of Engineering and Technology Conference on Crime and Security. ( pp.570-575). London, UK: Institution of Engineering and Technology. Publisher URL

Richardson, C. E., Enfield, L., Gibson, A. P., Everdell, N. L., Hebden, J. C., Arridge, S. R., Delpy, D. T., Keshtgar, M., Sainsbury, R., Douek, M. (2006). Imaging breast cancer non-invasively using three-dimensional optical tomography. British Association of Surgical Oncologists.

Richardson, C. E., Enfield, L., Gibson, A. P., Everdell, N. L., Hebden, J. C., Arridge, S. R., Delpy, D. T., Keshtgar, M., Sainsbury, R., Douek, M. (2006). Non-invasive optical imaging in patients with breast cancer. European Society of Surgical Oncologists (ESSO).

Richardson, C. E., Enfield, L., Gibson, A. P., Everdell, N. L., Hebden, J. C., Arridge, S. R., Delpy, D. T., Keshtgar, M., Sainsbury, R., Douek, M. (2006). Non-invasive three dimensional optical mammography. 8th Breast Cancer Conference. Milan:

Richardson, C. E., Enfield, L., Gibson, A. P., Everdell, N. L., Hebden, J. C., Arridge, S. R., Delpy, D. T., Keshtgar, M., Sainsbury, R., Douek, M. (2006). Three-dimensional optical imaging of the breast. SET for Britain Poster presentation.

Schweiger, M., Arridge, S. R., Dorn, O., Zacharopoulos, A., Kolehmainen, V. (2006). Reconstructing absorption and diffusion shape profiles in optical tomography by a level set technique. OPT LETT31(4), 471-473

Seunarine, K. K., Alexander, D. C. (2006). Linear Persistent Angular Structure MRI and non-linear Spherical Deconvolution for Diffusion MRI. International Society for Magnetic Resonance in Medicine 14th Annual Scientific Meeting and Exhibition: 2006 Proceedings. ( pp.2726-2726). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Seunarine, K. K., Cook, P. A., Embleton, K. V., Parker, G. J. M., Alexander, D. C. (2006). A general framework for multiple-fibre PICo tractography. Proc Medical Image Understanding and Analysis.

Shen, A. R., Brostow, G. J., Cipolla, R. (2006). Toward Automatic Bloodspatter Analysis in Crime Scenes. The Crime and Security Conference. ( Vol. Imaging for Crime Detection and Prevention pp.378-383-378-383).

Shepherd, T., Alexander, D. C. (2006). A support vector machine for 3D texture-based classification of bone in CT images. Medical Image Understanding and Analysis. ( pp.221-225).

Sikora, J., Zacharopoulos, A., Douiri, A., Schweiger, M., Horesh, L., Arridge, S. R., Ripoll, J. (2006). Diffuse photon propagation in multilayered geometries. Physics in Medicine and Biology51, 497-516

Sneller, B., Garde, E., Atkinson, D., Batchelor, P., Fox, N. C., Hill, D. L. G. (2006). FLOW ARTIFACTS IN MR IMAGING FOR ALZHEIMER'S DETECTION AND PROGRESSION. 10th International Conference on Alzheimer’s Disease and Related Disorders.

Tanner, C., Carter, T. J., Hawkes, D. J. (2006). 3D Rezoning for Finite Element Modelling of Large Breast Deformations. European Modelling Symposium. ( pp.51-53).

Tanner, C., Khazen, M., Kessar, P., Leach, M. O., Hawkes, D. J. (2006). Does Registration Improve the Performance of a Computer Aided Diagnosis System for Dynamic Contrast-Enhanced MR Mammography? IEEE International Symposium on Biomedical Imaging.

Tanner, C., Schnabel, J. A., Leach, M. O., Hose, D. R., Hill, D. L. G., Hawkes, D. J. (2006). Factors influencing the accuracy of biomechanical breast models. Medical Physics33(6), 1758-1769 Author URL

White, M. J., Atkinson, D., Collins, D., Leach, M. O., Hawkes, D. J. (2006). Parameterized modelling of liver deformation during free. ESMRMB.

Zacharopoulos, A., Arridge, S. R., Dorn, O., Kolehmainen, V., Sikora, J. (2006). Three-dimensional reconstruction of shape and piecewise constant region values for optical tomography using spherical harmonic parametrization and a boundary element method. Inverse Problems22(5), 1509-1532

Zhang, H., Yushkevich, P. A., Alexander, D. C., Gee, J. C. (2006). Deformable registration of diffusion tensor MR images with explicit orientation optimization. Medical image analysis10(5), 764-785 doi:10.1016/j.media.2006.06.004.

2005

Alexander, D. C. (2005). Maximum entropy spherical deconvolution for diffusion MRI. Lecture notes in computer science. ( Vol. 3565 pp.76-87). New York: Springer.

Alexander, D. C. (2005). Monte-Carlo studies of multiple-fibre reconstruction algorithms for diffusion MRI. International Society for Magnetic Resonance in Medicine 13th Annual Scientific Meeting and Exhibition: 2005 Proceedings. ( pp.1344-1344). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Alexander, D. C. (2005). Multiple-fiber reconstruction algorithms for diffusion MRI. Annals of the New York Academy of Sciences1046, 113-133

Alexander, D. C., Barker, G. J. (2005). Optimal imaging parameters for fiber-orientation estimation in diffusion MRI. NeuroImage27, 357-367

Alexander, D. C., Barker, G. J. (2005). Optimal imaging parameters for fibre-orientation estimation in diffusion MRI. ISMRM 13th Scientific Meeting and Exhibition. Author URL

Atkinson, D., Batchelor, P. G., Hill, D. L. G., Larkman, D. J., Hajnal, J. V. (2005). LSQR reconstruction of multi-shot diffusion weighted images incorporating non-linear phase corrections, coil sensitivities and data weighting. ESMRMB. ( pp.223-223).

Atkinson, D., Hajnal, J. V., Larkman, D. J., Batchelor, P. G., Hill, D. L. G. (2005). Multiple Coils for Regridding Multi-Shot EPI Diffusion Data. ISMRM. ( pp.1309-1309).

Austin, T., Gibson, A. P., Everdell, N. L., Herden, J. C., Schweiger, M., Arridge, S. R., Meek, J. H., Wyatt, J. S. (2005). Three dimensional optical imaging of neonatal brain activation. PEDIATRIC RESEARCH. ( Vol. 58 pp.357-357). INT PEDIATRIC RESEARCH FOUNDATION, INC.

Austin, T., Hebden, J. C., Gibson, A. P., Yusof, R. M., Arridge, S. R., Meek, J. H., Delpy, D. T., Wyatt, J. S. (2005). Imaging 3D changes in blood volume and oxygenation in response to functional activation. European Society for Paediatric Research. Siena:

Aylward, S. R., Cleary, K. R., Hawkes, D. J. (2005). Intraoperative image processing for surgical guidance. IEEE TRANS MED IMAGING24(278-0062 (Print), 11), 1401-1404 Author URL

Barratt, D. C., Penney, G. P., Chan, C. S. K., Slomczykowski, M., Carter, T. J., Edwards, P. J., Hawkes, D. J. (2005). Self-calibrating ultrasound-to-CT bone registration.Springer-Verlag. Author URL

Batchelor, P. G., Atkinson, D., Hill, D. L. G., Larkman, D., Hajnal, J., Irrarazaval, P. (2005). A Matrix Framework for General Non-Affine Motion Correction in Multishot Acquisitions. ISMRM.

Batchelor, P. G., Atkinson, D., Irarrazaval, P., Hill, D. L. G., Hajnal, J. V., Larkman, D. J. (2005). Matrix description of general motion correction applied to multishot images. Magnetic Resonance in Medicine54(5), 1273-1280 doi:10.1002/mrm.20656. Author URL

Batchelor, P. G., Atkinson, D., Irarrazaval, P., Larkman, D., Hajnal, J., Hill, D. L. G. (2005). Non-rigid motion correction applied to multishot images. ESMRMB. ( pp.192-192).

Batchelor, P. G., Calamante, F., Moakher, M., Atkinson, D., Connelly, A., Hill, D. L. G. (2005). A Rigorous Method for Calculus on Diffusion Tensors: Taking into Account Positivity of Eigenvalues. ISMRM. ( pp.1205-).

Batchelor, P. G., Moakher, D., Atkinson, F., Calamante, F., Connelly, A. (2005). A rigorous framework for diffusion tensor calculus. Magnetic Resonance in Medicine53, 221-225 doi:10.1002/mrm.20334. Author URL

Becker, W., Bergmann, A., Gibson, A. P., Everdell, N., Jennions, D., Schweiger, M., Arridge, S. R., Hebden, J. C. (2005). Multi-dimensional time-correlated single photon counting applied to diffuse optical tomography. Proceedings of SPIE, 34-42

Blackall, J. M., Penney, G. P., King, A. P., Hawkes, D. J. (2005). Alignment of Sparse Freehand 3D Ultrasound with Preoperative Images of the Liver and an Interventional Plan Using Models of Respiratory Motion and Deformation. IEEE Transactions on Medical Imaging24, 1405-1416

Blackall, J. M., Penney, G. P., King, A. P., Hawkes, D. J. (2005). Alignment of sparse freehand 3-D ultrasound with preoperative images of the liver using models of respiratory motion and deformation. IEEE TRANS MED IMAGING24(11), 1405-1416 doi:10.1109/TMI.2005.856751. Author URL

Buxton, B. F., Zografos, V. (2005). Flexible template and model matching using image intensity. DICTA 2005: Digital Image Computing Techniques and Applications: December 6-8 2005: Cairns Convention Centre, Cairns, Australia. ( pp.64-64). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

Campbell, J. L., Griffin, L. D. S., J A B, M., F, A. (2005). The effect of abnormal colour vision on the ability to identify and outline coloured clinical signs and to count stained bacilli in sputum. Clinical and Experimental Optometry88(6), 376-381 Author URL

Carter, T. J., Sermesant, M., Cash, D. M., Barratt, D. C., Tanner, C., Hawkes, D. J. (2005). Application of soft tissue modelling to image-guided surgery. Medical Engineering and Physics27(350-4533 (Print), 10), 893-909 Author URL

Choe, R., Corlu, A., Lee, K., Durduran, T., Konecky, S. D., Grosicka-Koptyra, M., Arridge, S. R., Czerniecki, B. J., Fraker, D. L., DeMichele, A., Chance, B., Rosen, M. A., and Yodh, A. G. (2005). Diffuse optical tomography of breast cancer during neoadjuvant chemotherapy: A case study with comparison to MRI. Medical Physics32(4), 1128-1139

Cook, P. A., Bai, Y., Hall, M. G., Nedjati-Gilani, S., Seunarine, K. K., Alexander, D. C. (2005). Camino: diffusion MRI reconstruction and processing. 2005 MICCAI Open-Source Workshop. Author URL Publisher URL

Cook, P. A., Boulby, P. A., Symms, M. R., Alexander, D. C. (2005). Optimal acquisition order of diffusion-weighted measurements on a sphere. 13th Scientific Meeting of the International Society for Magnetic Resonance in Medicine. ( pp.1305-).

Cook, P. A., Boulby, P. A., Symms, M. R., Alexander, D. C. (2005). Optimal acquisition order of diffusion-weighted measurements on a sphere. ISMRM 13th Scientific Meeting and Exhibition. Author URL

Cook, P. A., Zhang, H., Avants, B. B., Yushkevich, P. A., Alexander, D. C., Gee, J. C. (2005). An automated approach to connectivity-based partitions of brain structures. Lecture Notes in Computer Science. ( Vol. 3749(1) pp.164-171). Springer. Author URL

Cook, P. A., Zhang, H., Avants, B. B., Yushkevich, P., Alexander, D. C., Gee, J. C., Ciccarelli, O., Thompson, A. J. (2005). An automated approach to connectivity-based partitioning of brain structures. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005. ( Vol. 3749 pp.164-171).

Corlu, A., Choe, R., Durduran, T., Lee, K., Schweiger, M., Arridge, S. R., Hillman, E. M. C., Yodh, A. G. (2005). Diffuse optical tomography with spectral constraints and wavelength optimization. Applied Optics44(11), 2082-2093 doi:10.1364/AO.44.002082. Author URL

Corney, D. P. A., Byrne, E. L., Buxton, B. F., Jones, D. T. (2005). A Logical Framework for Template Creation and Information Extraction. Foundations of Semantic Oriented Data and Web Mining workshop, part of the Fifth IEEE International Conference on Data Mining. ( pp.14-23). Houston, TX: IEEE Computer Society. Author URL

Cox, B. T., Arridge, S. R., Koestli, K. P., Beard, P. C. (2005). Quantitative photoacoustic imaging: fitting a model of light transport to the initial pressure distribution. Proceedings of SPIE. ( Vol. 5697 pp.49-55).

Crum, W. R., Camara, O., Rueckert, D., Bhatia, K. K., Jenkinson, M., Hill, D. L. G. (2005). Generalised overlap measures for assessment of pairwise and groupwise image registration and segmentation. LECTURE NOTES IN COMPUTER SCIENCE. ( Vol. 3749 pp.99-106).

Crum, W. R., Tanner, C., Hawkes, D. J. (2005). Anisotropic multi-scale fluid registration: evaluation in magnetic resonance breast imaging. Physics in Medicine and Biology50(21), 5153-5174 doi:10.1088/0031-9155/50/21/014. Author URL

Curran, K. M., Alexander, D. C. (2005). Comparison of similarity measures for driving diffusion tensor registration. Proceedings of the International Society for Magnetic Resonance in Medicine: ISMRM 13th Scientific Meeting and Exhibition, Miami Beach, Florida, USA, 7-13 May 2005. ( pp.226-226). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Diamond, S. G., Huppert, T. J., Kolehmainen, V., Franceschini, M. A., Kaipio, J. P., Arridge, S. R., Boas, D. A. (2005). Physiological system identification with the Kalman filter in diffuse optical tomography. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2005, PT 2. ( Vol. 3750 pp.649-656). SPRINGER-VERLAG BERLIN.

Dias, M. B., Buxton, B. F. (2005). Implicit, view invariant, linear flexible shape modelling. Pattern Recognition Letters26(4), 433-447 doi:10.1016/j.patrec.2004.08.006. Author URL

Dierkes, T., Grosenick, D., Moesta, K. T., Möller, M., Schlag, P. M., Rinneberg, H., Arridge, S. R. (2005). Reconstruction of optical properties of phantom and breast lesion in vivo from paraxial scanning data. Physics in Medicine and Biology50, 2519-2542

Douiri, A., Schweiger, M., Riley, J., Arridge, S. R. (2005). Local diffusion regularization method for optical tomography reconstruction by using robust statistics. Optics Letters30(18), 2439-2441 Author URL

Edwards, P. J., Nijmeh, A. D., McGurk, M., Odell, E., Fenlon, M. R., Marsden, P. K., Hawkes, D. J. (2005). Validation of PET imaging by alignment to histology slices. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2005, PT 2. ( Vol. 3750 pp.968-975). SPRINGER-VERLAG BERLIN.

Farbiz, F., Cheok, A., Wei, L., Zhiying, Z., Xu, K., Prince, S., Billinghurst, M., Kato, H. (2005). Live 3-dimensional content for augmented reality. Journal of Multimedia7, 514-523

Gibson, A. P., Austin, T., Everdell, N., Meek, J. H., Wyatt, J. S., Schweiger, M., Arridge, S. R., Delpy, D. T., Hebden, J. C. (2005). 3D optical tomography of the neonatal brain. Proceedings of SPIE. ( Vol. 5859 pp.49-55). Author URL

Gibson, A. P., Hebden, J. C., Arridge, S. R. (2005). Recent advances in diffuse optical imaging. Physics in Medicine and Biology50, R1-R43 doi:10.1088/0031-9155/50/4/R01.

Gibson, A. P., Hebden, J. C., Riley, J., Everdell, N. L., Schweiger, M., Arridge, S. R., Delpy, D. T. (2005). Linear and nonlinear reconstruction for optical tomography of phantoms with nonscattering regions. Applied Optics44, 3925-3936 Author URL

Griffin, L. D. (2005). Deduction of feature categories from colour images. Spatial Vision. ( Vol. 18 pp.484-485). Publisher URL

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Griffin, L. D. (2005). Geometric texton theory: The 1-D, 2nd-order jet. Perception. ( Vol. 34 pp.246-247).

Griffin, L. D. (2005). editorial for special issue on Scale Space '03. International Journal of Computer Vision64(2-3), 95-96

Griffin, L. D. (Ed.) (2005). Scale Space '03 special issue. International Journal of Computer Vision64(2-3)

Griffin, L. D., Lillholm, M. (2005). Image Features and the 1-D, 2nd Order Gaussian Derivative Jet. Scale Space and PDE Methods in Computer Vision: 5th International Conference, Scale-Space 2005, Hofgeismar, Germany, April 7-9, 2005: Proceedings. ( Vol. 3459 pp.26-37). Berlin/Heidelberg, Germany: Springer-Verlag. Publisher URL

Griffin, L. D., Lillholm, M. (2005). Image features and the 1-D, 2(nd) order Gaussian derivative jet. SCALE SPACE AND PDE METHODS IN COMPUTER VISION, PROCEEDINGS. ( Vol. 3459 pp.26-37). SPRINGER-VERLAG BERLIN.

Hammond, P., Hutton, T. J., Allanson, J. E., Buxton, B., Campbell, L. E., Smith, J. C., Donnai, D., Karmiloff-Smith, A. K., Metcalfe, K., Murphy, K. C., Patton, M., Pober, B., Prescott, K., Scambler, P., Shaw, A., Smith, A. C. M., Stevens, A. F., Temple, I. K., Hennekam, R., Tassabehji, M. (2005). Discriminating power of localized three-dimensional facial morphology. The American Journal of Human Genetics77(6), 999-1010 doi:10.1086/498396. Author URL

Haroon, H. A., Luzzi, S., Alexander, D. C., Ciccarelli, O., Wheeler-Kingshott, C. A. M., Lambon-Ralph, M. A., Parker, G. J. M. (2005). Probabilistic tractography analysis of superior temporal gyrus connectivity to Wernicke's and Broca's areas. Proc. Intl. Soc. Mag. Reson. Med. ( pp.740-740). Author URL Publisher URL

Hawkes, D. J., Barratt, D., Blackall, J. M., Chan, C., Edwards, P. J., Rhode, K., Penney, G. P., McClelland, J., Hill, D. L. (2005). Tissue deformation and shape models in image-guided interventions: a discussion paper. MED IMAGE ANAL9(2), 163-175 doi:10.1016/j.media.2004.11.007. Author URL

Hebden, J. C., Yates, T. D., Gibson, A., Everdell, N., Arridge, S. R., Chicken, D. W., Douek, M., Keshtgar, M. R. S. (2005). Monitoring recovery after laser surgery of the breast with optical tomography: a case study. Applied Optics44(10), 1898-1904 Author URL

Hill, D. L., McLeish, K., Keevil, S. F. (2005). Impact of electromagnetic field exposure limits in Europe: Is the future of interventional MRI safe? ACAD RADIOL12(076-6332 (Print), 9), 1135-1142 Author URL

Hu, S., Buxton, B. F. (2005). Using an avatar to develop a system for the predication of human body pose from moments. Lecture Notes in Computer Science. ( Vol. 3784 pp.202-209). Springer, ISBN: 3-540-29621-2.

Hu, S., Mortensen, J., Buxton, B. F. (2005). A Real-Time Tracking System Developed for an Interactive Stage Performance. World Enformatika Conference, WEC'05, Istanbul, April 27-29. ( Vol. 5 pp.102-105). ISBN: 975-98458-4-9.

Keevil, S. F., Gedroyc, W., Gowland, P., Hill, D. L., Leach, M. O., Ludman, C. N., McLeish, K., McRobbie, D. W., Razavi, R. S., Young, I. R. (2005). Electromagnetic field exposure limitation and the future of MRI. BR J RADIOL78(007-1285 (Print), 935), 973- Author URL

Leung, K. K., Holden, M., Saeed, N., Brooks, K., Buckton, J., Williams, A., Campbell, S. P., Changani, K., Reid, D., Rueckert, D., Hajnal, J. V., Hill, D. L. G. (2005). Automated quantitative analysis of rheumatoid arthritis lesions in MRI. ISMRM.

Manzke, R., Koken, P., Hawkes, D., Grass, M. (2005). Helical cardiac cone beam CT reconstruction with large area detectors: a simulation study. Physics in Medicine and Biology50(7), 1547-1568

McLaughlin, R. A., Hipwell, J., Hawkes, D. J., Noble, J. A., Byrne, J. V., Cox, T. C. (2005). A comparison of a similarity-based and a feature-based 2-D-3-D registration method for neurointerventional use. IEEE T MED IMAGING24(8), 1058-1066 doi:10.1109/TMI.2005.852067.

McLaughlin, R. A., Hipwell, J., Hawkes, D. J., Noble, J. A., Byrne, J. V., Cox, T. C. (2005). A comparison of a similarity-based and a feature-based 2-D-3-D registration method for neurointerventional use. IEEE TRANS MED IMAGING24(278-0062 (Print), 8), 1058-1066 Author URL

Muthurangu, V., Atkinson, D., Sermesant, M., Miquel, M. E., Hegde, S., Johnson, R., Andriantsimiavona, R., Taylor, A. M., Baker, E., Tulloh, R., Hill, D., Razavi, R. S. (2005). Measurement of total pulmonary arterial compliance using invasive pressure monitoring and MR flow quantification during MR-guided cardiac catheterization. American Journal of Physiology - Heart and Circulatory Physiology289(3), H1301-H1306 doi:10.1152/ajpheart.00957.2004. Author URL

Muthurangu, V., Sermesant, M., Atkinson, D., Hill, D. L. G., Razavi, R. S. (2005). A novel method of measuring PVR and total pulmonary arterial compliance using simultaneous pressure monitoring and phase contrast MR flow quantification. ISMRM. ( pp.599-599).

Nahmias, J. D., Steed, A., Buxton, B. (2005). Analysis of cost functions and structured light patterns for modern dynamic programming stereo algorithms. IEE International Conference on Visual Information Engineering (VIE 2005). ( pp.149-156). London, UK: Institution of Electrical Engineers. Publisher URL

Nahmias, J. D., Steed, A., Buxton, B. (2005). Evaluation of Modern Dynamic Programming Algorithms for Real-time Active Stereo Systems. The 13th International Conference in Central Europe on Computer Graphics, Visualization and Computer Vision 2005, in co-operation with EUROGRAPHICS: W S C G ' 2005: Short Papers. ( pp.113-116). Plzen, Czech Republic: University of West Bohemia. Author URL Publisher URL

Nasrallah, A., Griffin, L. (2005). Multi-local statistics of gradient directions in natural images. SPATIAL VISION18(4), 503-504

Nedjati-Gilani, S., Cook, P. A., Parker, G. J. M., Alexander, D. C. (2005). . Medical Image Understanding and Analysis.

Nedjati-Gilani, S., Cook, P. A., Parker, G. J., Alexander, D. C. (2005). Voxel-Based Classification of White Matter Fibre Complexity in Diffusion MRI. International Society for Megnetic Resonance in Medicine (ISMRM) - British Chapter. ( pp.233-).

Parker, G. J. M., Alexander, D. C. (2005). Probabilistic Anatomical Connectivity Derived from the Microscopic Persistent Angular Structure of Cerebral Tissue. International Society for Magnetic Resonance in Medicine 13th Annual Scientific Meeting and Exhibition: 2005 Proceedings. ( pp.735-735). Berkeley, US: International Society for Magnetic Resonance in Medicine. Author URL Publisher URL

Parker, G. J. M., Alexander, D. C. (2005). Probabilistic anatomical connectivity derived from the microscopic persistent angular structure of cerebral tissue. Philosophical Transactions of the Royal Society B: Biological Sciences360(1457), 893-902 doi:10.1098/rstb.2005.1639. Author URL

Parker, G. J., Luzzi, S., Alexander, D. C., Wheeler-Kingshott, C. A., Ciccarelli, O., Lambon Ralph, M. A. (2005). Lateralization of ventral and dorsal auditory-language pathways in the human brain. NeuroImage24(3), 656-666 Author URL

Penney, G. P., Barratt, D. C., Chan, C. S. K., Slomczykowski, M., Carter, T. J., Edwards, P. J., Hawkes, D. J. (2005). Cadaver validation of intensity-based ultrasound to CT registration.Springer-Verlag. Author URL

Powell, H. W. R., Parker, G. J. M., Alexander, D. C., Symms, M. R., Boulby, P. A., Barker, G. J., Koepp, M. J., Duncan, J. S. (2005). MR-tractography predicts visual field defects following temporal lobe resection. ISMRM 13th Scientific Meeting and Exhibition.

Powell, H. W., Parker, G. J., Alexander, D. C., Symms, M. R., Boulby, P. A., Wheeler-Kingshott, C. A., Barker, G. J., Koepp, M. J., Duncan, J. S. (2005). MR tractography predicts visual field defects following temporal lobe resection. Neurology65(4), 596-599 Author URL

Prieto, C., Guarini, M., Hill, D. L. G., Boubertakh, R. B., Batchelor, P. G., Hajnal, J., Irrarazaval, P. (2005). Under-Sampled Dynamic Data Reconstruction Based on Object Motion Estimation. ISMRM.

Prince, S., David, S., Gallant, J., Elder, J. (2005). A geometric model of V1 neurons. Early Vision: Computational and Biological.

Prince, S., Elder, J., Hou, Y., Oleviskiy, Y. (2005). Statistical cue integration for foveated wide-field surveillance. IEEE Computer Vision and Pattern Recognition. ( pp.603-610).

Prince, S., Sizintsev, M., Hou, Y., Elder, J. (2005). Pre-attentive face detection for foveated wide-field surveillance. IEEE Workshop on Applications in Computer Vision. ( pp.439-446).

Rhode, K. S., Lambrou, T., Hawkes, D. J., Seifalian, A. M. (2005). Novel approaches to the measurement of arterial blood flow from dynamic digital X-ray images. IEEE TRANS MED IMAGING24(278-0062 (Print), 4), 500-513 Author URL

Ruto, A., Buxton, B. F. (2005). Application of a robust and efficient ICP algorithm for fitting a deformable 3D human torso model to noisy data. Proceedings, DICTA 2005, Digital Image Computing: Techniques and Applications, December 6-8, 2005, Cairns Convention Centre, Brisbane, Australia. ( pp.62-62). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

Schweiger, M., Camara-Rey, O., Crum, W. R., Lewis, E., Schnabel, J., Arridge, S. R., Hill, D. L. G., Fox, N. (2005). An inverse problem approach to the estimation of volume change. LECTURE NOTES IN COMPUTER SCIENCE. ( Vol. 3750 pp.616-623). Springer-Verlag.

Spanlang, B., Vassilev, T. I., Walters, J., Buxton, B. F. (2005). A Virtual Clothing System for Retail and Design. Research Journal of Textile and Apparel9(1), 74-87

Tarvainen, T., Kolehmainen, V., Vauhkonen, M., Vanne, A., Gibson, A. P., Schweiger, M., Arridge, S. R., Kaipio, J. P. (2005). Computational calibration method for optical tomography. Applied Optics44(10), 1879-1888

Tarvainen, T., Vauhkonen, M., Kolehmainen, V., Arridge, S. R., Kaipio, J. P. (2005). Coupled radiative transfer equation and diffusion approximation model for photon migration in turbid medium with low-scattering and non-scattering regions. Physics in Medicine and Biology50, 4913-4930

Wilczkowiak, M., Brostow, G. J., Tordoff, B., Cipolla, R. (2005). Hole Filling Through Photomontage. Proceedings of the British Machine Vision Conference 2005 (Oxford, Sept 2005). ( pp.492-501). Oxford, UK: British Machine Vision Association. Author URL Publisher URL

Yates, T. D., Hebden, J. C., Gibson, A. P., Enfield, L., Everdell, N. L., Arridge, S. R., Delpy, D. T. (2005). Time-resolved optical mammography using a liquid coupled interface. Journal of Biomedical Optics10, 054011- Author URL

Yates, T. D., Hebden, J. C., Gibson, A. P., Everdell, N. L., Arridge, S. R., Douek, M. (2005). Optical tomography of the breast using a multi-channel time-resolved imager. Physics in Medicine and Biology50, 2503-2517 doi:10.1088/0031-9155/50/11/005.

Zografos, V., Buxton, B. F. (2005). Affine invariant, model-based object recognition using robust metrics and Bayesian statistics. Springer Lecture Notes in Computer Science. ( Vol. 3656 pp.407-414).

2004

Alexander, D. C. (2004). A comparison of q-ball and PASMRI on sparse diffusion MRI data. International Society for Magnetic Resonance in Medicine 12th Annual Scientific Meeting and Exhibition: 2004 Proceedings. ( pp.90-90). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Arridge, S. R. (2004). Time domain optical tomography. 2004 2ND IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: MACRO TO NANO, VOLS 1 and 2. ( pp.1486-1489). IEEE.

Atkinson, D., Hajnal, J. V., Larkman, D. J., Batchelor, P. G., Hill, D. L. G. (2004). Parallel MRI for Regridding Multi-Shot Diffusion Data. Second International Workshop on Parallel MRI, Zuerich. ( pp.106-106).

Atkinson, D., Larkman, D. J., Batchelor, P. G., Hill, D. L., Hajnal, J. V. (2004). Coil-based artifact reduction. Magnetic Resonance in Medicine52(4), 825-830 doi:10.1002/mrm.20226. Author URL

Atkinson, D., Larkman, D., Batchelor, P. G., Hajnal, J., Hill, D. L. G. (2004). CARE: Coil-based Artifact Reduction. ISMRM. ( pp.96-96).

Atkinson, D., Larkman, D., Batchelor, P. G., Hajnal, J., Hill, D. L. G. (2004). Multiple Coils for Reduction of Flow Artefacts in MR Images. Lecture Notes in Computer Science. ( Vol. 3217 pp.1097-1098).

Austin, T., Hebden, J. C., Gibson, A., Yusof, R. M., Arridge, S. R., Meek, J. H., Delpy, D. T., Wyatt, J. S. (2004). Optical imaging of the neonatal brain. European Society for paediatric research. Stockholm:

Baltes, C., Kozerke, S., Atkinson, D., Boesiger, P. (2004). Restrospective Respiratory Motion Correction for Navigated Cine Velocity Mapping. Journal of Cardiovascular Magnetic Resonance6(4), 785-792 doi:10.1081/JCMR-200036119.

Batchelor, P. G., Atkinson, D., Hajnal, J., Larkman, D., Hill, D. L. G. (2004). Parallel Imaging and MR Motion Correction. Second Internationl Workshop on Parallel MRI, Zuerich. ( pp.63-63).

Batchelor, P. G., Atkinson, D., Hill, D. L. G., Larkman, D. J., Hajnal, J. V. (2004). A Matrix Framework for MR Motion Correction. Medical Image Understanding and Analysis (MIUA). ( pp.5-8).

Batchelor, P. G., Atkinson, D., Larkman, D., Hajnal, J., Hill, D. L. G. (2004). Fitting Coil and Data in Parallel Imaging. ISMRM. ( pp.2645-).

Batchelor, P. G., Calamante, F., Atkinson, D., Tournier, D., Connelly, A., Hill, D. L. G. (2004). Classification of Fibre Tracts Using Differential Geometry. ISMRM. ( pp.1278-).

Brostow, G. J., Essa, I., Steedly, D., Kwatra, V. (2004). Novel skeletal representation for articulated creatures. COMPUTER VISION - ECCV 2004, PT 3. ( Vol. 3023 pp.66-78). SPRINGER-VERLAG BERLIN.

Byrne, J. V., Colominas, C., Hipwell, J., Cox, T., Noble, J. A., Penney, G. P., Hawkes, D. J. (2004). Assessment of a technique for 2D-3D registration of cerebral intra-arterial angiography. BR J RADIOL77(007-1285 (Print), 914), 123-128 Author URL

Chan, C. S. K., Barratt, D. C., Edwards, P. J., Slomczykowski, M., Carter, T. J., Hawkes, D. J. (2004). Cadaver validation of the use of ultrasound for 3D model instantiation of bony anatomy in image guided orthopaedic surgery.Springer-Verlag. Author URL

Chan, C. S. K., Edwards, P. J., Barratt, D. C., Slomczykowski, M., Hawkes, D. J. (2004). Ultrasound-based reconstruction and registration of 3D bone anatomy using statistical shape. Computer Assisted Surgery - 4th Annual Meeting of CAOS-International Proceedings. ( pp.24-25). CAOS International.

Chandler, A. G., Schnabel, J. A., Hawkes, D. J., Netsch, T., Cocosco, C. A. (2004). Slice-to-volume registration using mutual information between probabilistic image classifications. Proceedings of SPIE. ( Vol. 5370 pp.1120-1129). Bellingham, US: SPIE - The International Society for Optical Engineering. Publisher URL

Chatten, A. J., Barnham, K. W. J., Buxton, B. F., Ekins-Daukes, N. J., Malik, M. A. (2004). Quantum dot solar concentrators. SEMICONDUCTORS. ( Vol. 38 pp.909-917). AMER INST PHYSICS.

Cook, P. A., Alexander, D. C., Parker, G. J. M. (2004). Modelling noise-induced fibre-orientation error in Diffusion-Tensor MRI. ISMRM Twelth Scientific Meeting and Exhibition. Washington DC:

Cook, P. A., Alexander, D. C., Parker, G. J. M. (2004). Modelling noise-induced fibre-orientation error. ISMRM Twelth Scientific Meeting and Exhibition. Kyoto:

Corney, D. P. A., Buxton, B. F., Langdon, W. B., Jones, D. T. (2004). BioRAT: extracting biological information from full-length papers. Bioinformatics20(17), 3206-3213 Author URL

Coulon, O. P., Alexander, D. C., Arridge, S. R. (2004). Diffusion tensor magnetic resonance image regularization. Medical image analysis8(1), 27-47 doi:10.1016/j.media.2003.06.002.

Crum, W. R., Griffin, L. D., Hawkes, D. J. (2004). Automatic estimation of error in voxel-based registration, in Medical Image Computing and Computer-Assisted Intervention.Miccai 2004, Pt 1, Proceedings.

Crum, W. R., Hartkens, T., Hill, D. L. (2004). Non-rigid image registration: theory and practice. BR J RADIOL77 Spec No 2(007-1285 (Print)), S140-S153 doi:10.1259/bjr/25329214. Author URL

Curran, K. M., Alexander, D. C. (2004). Orientation coherence optimization in tensor image registration. Medical Image Understanding and Analysis.

Dias, M. B., Buxton, B. F. (2004). Separating shape and pose variations. Image and Vision Computing22(10), 851-861

Griffin, L. D. (2004). Optimality of the basic colour categories. Journal of Vision. ( Vol. 4 pp.309-309). Rockville, US: ARVO: The Association for Research in Vision and Ophthalmology. Publisher URL

Griffin, L. D. (2004). Wherefore the basic colour terms? Perception33(6), 6-

Griffin, L. D., Lillholm, M., Nielsen, M. (2004). Natural image profiles are most likely to be step edges. Vision Research44(4), 407-421

Hammond, P., Hutton, T. J., Allanson, J., Buxton, B., Campbell, L., Karmiloff-Smith, A., Murphy, K., Patton, M., Pober, B., Smith, A., Tassabehji, M. (2004). RP404. American Society for Human Genetics, Toronto.

Hammond, P., Hutton, T. J., Allanson, J., Buxton, B., Karmiloff-Smith, A., Patton, M., Pober, B., Smith, A., Tassabehji, M. (2004). 3D dense surface models identify the most discriminating facial features in dysmorphic syndromes. 54th Annual Meeting of the American Society for Human Genetics, Toronto, Canada. ( Vol. 1 pp.1-1).

Hebden, J. C., Gibson, A., Austin, T., Yusof, R., Everdell, N., Delpy, D. T., Arridge, S. R., Meek, J. H., Wyatt, J. S. (2004). Imaging changes in blood volume and oxygenation in the newborn infant brain using three-dimensional optical tomography. Physics in Medicine and Biology49(7), 1117-1130 doi:10.1088/0031-9155/49/7/003. Author URL

Hill, D. L. (2004). Ten years of preimplantation genetic diagnosis-aneuploidy screening: review of a multicenter report. FERTIL STERIL82(015-0282 (Print), 2), 300-301 Author URL

Holden, M., Griffin, L. D., Saeed, N., Hill, D. L. G. H. (2004). Multi-channel mutual information using scale space, in Medical Image Computing and Computer-Assisted Intervention.Miccai 2004.

Johnson, L. G., Edwards, P. J., Griffin, L. D., Hawkes, D. J. (2004). Depth perception of stereo overlays in image-guided surgery. Medical Imaging 2004: Image Perception, Observer Performance, and Technology Assessment, 263-272

Kastanis, I., Arridge, S. R., Silver, A. M. S., Hill, D. L., Ravazi, R. (2004). Reconstruction of the heart boundary from undersampled cardiac MRI using Fourier shape descriptors and local basis functions. 2004 2ND IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: MACRO TO NANO, VOLS 1 and 2. ( pp.1063-1066). IEEE.

Kozerke, S., Hegde, S., Schaeffter, T., Lamerichs, R., Razavi, R., Hill, D. L. (2004). Catheter tracking and visualization using 19F nuclear magnetic resonance. Magnetic Resonance in Medicine52(3), 693-697 doi:10.1002/mrm.20202. Author URL

Langdon, W. B., Buxton, B. F. (2004). Genetic programming for mining DNA chip data from cancer patients. Genetic Programming and Evolvable Machines5(3), 251-257 Author URL

Larkman, D. J., Atkinson, D., Hajnal, J. V. (2004). Artifact reduction using parallel imaging methods. Topics in Magnetic Resonance Imaging15(4), 267-275 doi:10.1097/01.rmr.0000143782.39690.8a.

Larsen, L., Griffin, L. D. (2004). Can a continuity heuristic be used to resolve the inclination ambiguity of polarized light imaging? Computer Vision and Mathematical Methods in Medical and Biomedical Image Analysis, ECCV 2004 Workshops CVAMIA and MMBIA, Prague, Czech Republic, May 15, 2004, Revised Selected Papers. ( Vol. 3117 pp.365-375). Berlin, Germany: Springer. Publisher URL

Manzke, R., Grass, M., Hawkes, D. (2004). Artifact analysis and reconstruction improvement in helical cardiac cone beam CT. IEEE Transactions on Medical Imaging23(9), 1150-1164 doi:10.1109/TMI.2004.830804.

Manzke, R., Kohler, T., Nielsen, T., Hawkes, D., Grass, M. (2004). Automatic phase determination for retrospectively gated cardiac CT. Medical Physics31(12), 3345-3362

McLeish, K., Kozerke, S., Crum, W. R., Hill, D. L. (2004). Free-breathing radial acquisitions of the heart. Magnetic Resonance in Medicine52(5), 1127-1135 doi:10.1002/mrm.20252. Author URL

Miquel, M. E., Hegde, S., Muthurangu, V., Corcoran, B. J., Keevil, S. F., Hill, D. L., Razavi, R. S. (2004). Visualization and tracking of an inflatable balloon catheter using SSFP in a flow phantom and in the heart and great vessels of patients. MAGN RESON MED51(740-3194 (Print), 5), 988-995 Author URL

Muthurangu, V., Taylor, A., Andriantsimiavona, R., Hegde, S., Miquel, M. E., Tulloh, R., Baker, E., Hill, D. L., Razavi, R. S. (2004). Novel method of quantifying pulmonary vascular resistance by use of simultaneous invasive pressure monitoring and phase-contrast magnetic resonance flow. Circulation110(7), 826-834 doi:10.1161/01.CIR.0000138741.72946.84. Author URL

O'Gorman, R. L., Selway, R. P., Reid, C. J., Hotton, G. R., Hall, E., Jarosz, J. M., Polkey, C. E., Hill, D. L. (2004). Registered computed tomography images as an alternative to postimplantation magnetic resonance imaging in the assessment of subthalamic electrode placement. J COMPUT ASSIST TOMOGR28(363-8715 (Print), 4), 548-550 Author URL

Parker, G. J. M., Luzzi, S., Lambon-Ralph, M. A., Wheeler-Kingshott, C. A. M., Ciccarelli, O., Alexander, D. C. (2004). Lateralisation of connective pathways between language centres demonstrated using group analysis of fibre tracking incorporating crossing fibre information. International Society for Magnetic Resonance in Medicine 12th Annual Scientific Meeting and Exhibition: 2004 Proceedings. ( pp.1269-1269). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Penney, G. P., Blackall, J. M., Hamady, M. S., Sabharwal, T., Adam, A., Hawkes, D. J. (2004). Registration of freehand 3D ultrasound and magnetic resonance liver images. Medical Image Analysis8(1), 81-91 doi:10.1016/j.media.2003.07.003. Author URL

Schnabel, J. A., Batchelor, P. G., Tanner, C., Quist, M., Gerritsen, F. A., Hawkes, D. J. (2004). Modelling tissue deformations using free-form modes of vibration. Medical Image Understanding and Analysis (MIUA).

Spanlang, B., Vassilev, T., Buxton, B. F. (2004). Compositing Photographs with Virtual Clothes for Design. Proceedings of the 5th International Conference on Computer Systems and Technologies 2004, Rousse, Bulgaria, June 17-18, 2004. New York, US: ACM Press. Publisher URL

Tanner, C., Khazen, M., Kessar, P., Leach, M. O., Hawkes, D. J. (2004). Classification Improvement by Segmentation Refinement: Application to Contrast-Enhanced MR-Mammography. LNCS. ( Vol. 3216 pp.184-191).

Vilhunen, T., Kohlehmainen, V., Vauhkonen, M., Vanne, A., Gibson, A. P., Schweiger, M., Arridge, S. R., Kaipio, J. P. (2004). Computational calibration method for optical tomography. Biomedical Topical Meeting, OSA Technical Digest. Washington DC, US: Optical Society of America. Publisher URL

Ward, J. J., McGuffin, L. J., Bryson, K., Buxton, B. F., Jones, D. T. (2004). The DISOPRED server for the prediction of protein disorder. Bioinformatics20(13), 2138-2139

Ward, J. J., Sodhi, J. S., McGuffin, L. J., Buxton, B. F., Jones, D. T. (2004). Prediction and functional analysis of native disorder in proteins from the three kingdoms of life. Journal of Molecular Biology337(3), 635-645 doi:10.1016/j.jmb.2004.02.002. Author URL

Yates, T. D., Hebden, J. C., Gibson, A. P., Everdell, N. L., Delpy, D. T., Arridge, S. R., Douek, M., Chicken, W. (2004). Clinical results from a 32-channel time resolved system used to image the breast. Biomedical Topical Meeting, OSA Technical Digest. Washington, DC, US: Optical Society of America. Publisher URL

de Cunha, D. A., Eadie, L. H., Barbur, J. L., Hawkes, D. J., Seifalian, A. M. (2004). The effect of image colour distortion on evaluation of donor liver suitability for transplantation. COMPUT BIOL MED34(010-4825 (Print), 7), 615-632 Author URL

2003

Atkinson, D., Batchelor, P. G., Larkman, D. J., Hill, D. L. G., Hajnal, J. V. (2003). Generalised Motion Correction in Parallel Imaging. ISMRM. ( pp.1063-).

Atkinson, D., Hill, D. L. G. (2003). Reconstruction after Rotational Motion. Magnetic Resonance in Medicine49(1), 183-187 doi:10.1002/mrm.10333. Author URL

Atkinson, D., Kozerke, S., Razavi, R. (2003). Retrospective Image Correction Combined with Slice Tracking for Respiratory Motion Compensation. Journal of Cardiovascular Magnetic Resonance5(1), 270-271

Batchelor, P. G., Atkinson, D., Hill, D. L. G., Calamante, F., Connelly, A. (2003). Anisotropic noise propagation in diffusion tensor MRI sampling schemes. MAGN RESON MED49(6), 1143-1151 doi:10.1002/mrm.10491.

Batchelor, P. G., Atkinson, D., Hill, D. L. G., Calamante, F., Connelly, A. (2003). Icosahedral, direction encoding of the diffusion tensor propagages noise isotropically . Magnetic Resonance in Medicine49(6), 1143-1151

Batchelor, P. G., Atkinson, D., Hill, D. L. G., Calamante, F., Connelly, A. (2003). The Effect on DT-MRI of Increased Number of Directions: Further Advances on Icosahedral Schemes. ISMRM. ( pp.2144-).

Batchelor, P. G., Calamante, F., Atkinson, D., Hill, D. L. G., Blyth, R., Connelly, A. (2003). Classification of White Matter Tract Shapes from DTI Without Registration. MIUA.

Batchelor, P. G., Calamante, F., Atkinson, D., Hill, D. L. G., Blyth, R., Connelly, A. (2003). Classification of bundles of white matter tract from DTI without registration. ESMRMB. ( pp.189-).

Blyth, R., Cook, P. A., Alexander, D. C. (2003). Tractography with multiple fibre directions. ISMRM 11th Scientific Meeting and Exhibition. Author URL

Buxton, B. F., Dias, M. B. (2003). The Principles of View Invariant, Image-Based Linear Flexible Shape Modelling. Proceedings of the Fifth International Conference on Advances in Pattern Recognition: ICAPR 2003: Koldata, India, December 10-13, 2003. ( pp.19-24). New Dehli, India: Allied Publishers. Publisher URL

Buxton, B., Dias, M. B. (2003). . University College London (UCL), Department of Computer Science.

Bydder, M., Atkinson, D., Larkman, D. J., Hill, D. L., Hajnal, J. V. (2003). SMASH navigators. Magnetic Resonance in Medicine49(3), 493-500 doi:10.1002/mrm.10388. Author URL

Chatten, A. J., Barnham, K. W. J., Buxton, B. F., Ekins-Daukes, N. J., Malik, M. A. (2003). A new approach to modelling quantum dot concentrators. SOL ENERG MAT SOL C75(3-4), 363-371

Cook, P. A., Alexander, D. C. (2003). Inter-subject comparison of brain connectivity using diffusion tensor magnetic resonance imaging. Medical Image Understanding and Analysis (MIUA).

Corlu, A., Durduran, T., Choe, R., Schweiger, M., Hillman, E. M. C., Arridge, S. R., Yodh, A. G. (2003). Uniqueness and wavelength optimization in continuous-wave multispectral diffuse optical tomography. OPT LETT28(23), 2339-2341

Corney, D. P. A., Buxton, B. F., Langdon, W. B., Charlwood, J., Woolard, P. M., Jones, D. T. (2003). Extracting Biological Information from Full-length Papers.

Coulon, O. P., Alexander, D. C., Arridge, S. R. (2003). Regularisation d'images de tenseurs de diffusion par resonance magnetique. Reconnaissance des formes et intelligence artificielle.

Crum, W. R., Griffin, L. D., Hill, D. L., Hawkes, D. J. (2003). Zen and the art of medical image registration: correspondence, homology, and quality. NEUROIMAGE20(053-8119 (Print), 3), 1425-1437 doi:10.1016/j.neuroimage.2003.07.014. Author URL

Crum, W. R., Hill, D. L., Hawkes, D. J. (2003). Information theoretic similarity measures in non-rigid registration. INF PROCESS MED IMAGING18(011-2499 (Print)), 378-387 Author URL

Curran, K. M., Alexander, D. C. (2003). Diffusion tensor orientation matching for image registration. Proceedings of SPIE - The International Society for Optical Engineering5032 I, 149-156

Curran, K. M., Alexander, D. C. (2003). Orientation matching for registration of diffusion tensor images. SPIE: Medical Imaging.

Dias, M. B., Buxton, B. (2003). Exploring the Possibility of Estimating Bas-Relief angles, Illumination Direction and Surface Texture from Multiple Images.

Dias, M. B., Buxton, B. F. (2003). Advances in Integrated Shape and Pose Modelling.

Dias, M. B., Buxton, B. F. (2003). Enforcing a shape correspondence between two views of a 3D non-rigid object. Proc. of the 8th Iberoamerican Congress on Pattern Recognition. ( Vol. 2905 pp.163-170). Springer-Verlag, Berlin.

Dias, M. B., Buxton, B. F. (2003). Estimating Bas-Relief angles, Illumination Direction and Surface Texture. Proceedings of the Fifth International Conference on Advances in Pattern Recognition, ICAPR-2003. ( pp.383-386). Mumbai, India: Allied Publishers, Pvt. Limited. Publisher URL

Dias, M. B., Buxton, B. F. (2003). Separating shape and pose variations.

Duda, J. T., Rivera, M., Alexander, D. C., Gee, J. C. (2003). A method for non-rigid registration of diffusion tensor magnetic resonance images. Proceedings of SPIE - The International Society for Optical Engineering5032 II, 1186-1196

Duda, J., Rivera, M., Alexander, D. C., Gee, J. C. (2003). Optical flow based method for non-rigid registration of diffusion tensor magnetic resonance images. SPIE: Medical Imaging.

Gibson, A. P., Riley, J., Schweiger, M., Hebden, J. C., Arridge, S. R., Delpy, D. T. (2003). A method for generating patient-specific finite element meshes for head modelling. Physics in Medicine and Biology(48), 481-495 doi:10.1088/0031-9155/48/4/305. Author URL

Gibson, A., Schweiger, M., Hebden, J. C., Arridge, S. R., Delpy, D. T. (2003). A method for generating patient-specific finite element meshes for head modelling. 4th Conf. Biomed. Appl. Elect. Int. Tomog.. Manchester:

Gibson, A., Yusof, R. M., Dehghani, H., Riley, J., Everdell, N., Richards, R., Hebden, J. C., Schweiger, M., Arridge, S. R., Delpy, D. T. (2003). Optical tomography of a realistic neonatal head phantom. APPLIED OPTICS. ( Vol. 42 pp.3109-3116). OPTICAL SOC AMER.

Griffin, L. D., Lillholm, M. (2003). Mode estimation by pessimistic scale space tracking. In Griffin, L. D., Lillholm, M. (Eds.). Proc. Scale Space '03, LNCS vol. 2695 ( pp.271-286).

Griffin, L. D., Lillholm, M. (Eds.) (2003). Proceedings of the Scale Space 2003 conference.()(2695). Springer.

Hansen, M. S., Atkinson, D., Kozerke, S. (2003). Retrospective correction of post navigator delays in coronary MRA. ISMRM. ( pp.1622-).

Hartkens, T., Hill, D. L., Castellano-Smith, A. D., Hawkes, D. J., Maurer, C. R., Jr, M., A J, H., W A, L., H, T., C, L. (2003). Measurement and analysis of brain deformation during neurosurgery. IEEE Transactions on Medical Imaging22(1), 82-92 doi:10.1109/TMI.2002.806596. Author URL

Hawkes, D. J., Hill, D. L. (2003). Medical imaging at Guy's Hospital, King's College London. IEEE TRANS MED IMAGING22(278-0062 (Print), 9), 1033-1041 Author URL

Heino, J., Arridge, S., Sikora, J., Somersalo, E. (2003). Anisotropic effects in highly scattering media. Physical Review E68(3), 031908-1-031908-8 doi:10.1103/PhysRevE.68.031908. Author URL

Hickman, S. J., Coulon, O., Parker, G. J. M., Barker, G. J., Stevenson, V. L., Chard, D. T., Arridge, S. R., Thompson, A. J., Miller, D. H. (2003). Application of a B-spline active surface technique to the measurement of cervical cord volume in multiple sclerosis from three-dimensional MR images. Journal of Magnetic Resonance Imaging18(3), 368-371 doi:10.1002/jmri.10354. Author URL

Hipwell, J. H., Penney, G. P., McLaughlin, R. A., Rhode, K., Summers, P., Cox, T. C., Byrne, J. V., Noble, J. A., Hawkes, D. J. (2003). Intensity-based 2-D-3-D registration of cerebral angiograms. IEEE TRANS MED IMAGING22(278-0062 (Print), 11), 1417-1426 Author URL

Hutton, T. J., Buxton, B. F., Hammond, P. (2003). Automated registration of 3D faces using dense surface models. British Machine Vision Conference 2003 Proceedings. ( Vol. 2 pp.439-448). Malvern, UK: British Machine Vision Association.

Hutton, T. J., Buxton, B. F., Hammond, P. (2003). Automated registration of 3D faces using dense surface models. Proceedings of the British Machine Vision Conference, Norwich. ( Vol. 1 pp.439-448).

Hutton, T. J., Buxton, B. F., Hammond, P., Potts, H. W. W. (2003). Estimating average growth trajectories in shape-space using kernel smoothing. IEEE Transactions on Medical Imaging22(6), 747-753 doi:10.1109/TMI.2003.814784. Author URL

Jansons, K. M., Alexander, D. C. (2003). Persistent Angular Structure: new insights from diffusion MRI data. Dummy version. Inf Process Med Imaging18, 672-683

Jansons, K. M., Alexander, D. C. (2003). Persistent angular structure: New insights from diffusion MRI data. Dummy version. Inf Process Med Imaging18, 672-683

Jansons, K. M., Alexander, D. C. (2003). Persistent angular structure: new insights from diffusion magnetic resonance imaging data. Inverse Problems19, 1031-1046 doi:10.1088/0266-5611/19/5/303. Author URL

Johnson, L. G., Edwards, P. J., Barratt, D. C., Hawkes, D. J. (2003). The problem of perceiving accurate depth information through a surgical augmented reality system. Proceedings of the 1st International Symposium on Computer Aided Surgery around the Head. ( pp.88-88).

Kolehmainen, V., Prince, S., Arridge, S. R., Kaipio, J. P. (2003). State-estimation approach to the nonstationary optical tomography problem. Journal of the Optical Society of America A: Optics, Image Science, and Vision(20), 876-889

Langdon, W. B., Barrett, S. J., Buxton, B. (2003). Comparison of AdaBoost and Genetic Programming for combining Neural Networks for Drug Discovery. Proceedings of EvoBIO'2003. ( Vol. 2611 pp.87-98). Springer-Verlag.

Langdon, W. B., Barrett, S. J., Buxton, B. F. (2003). Comparison of AdaBoost and genetic programming for combining neural networks for drug discovery. LNCS. ( Vol. 2611 pp.87-98). Springer-Verlag.

Langdon, W. B., Barrett, S. J., Buxton, B. F. (2003). Predicting Biochemical Interactions - Human P450 2D6 Enzyme Inhibition. The 2003 Congress on Evolutionary Computation, CEC 2003: Canberra, Australia, 8-12 December, 2003. ( Vol. 2 pp.807-814). Piscataway, US: IEEE Computer Society. Publisher URL

Marti-Lopez, L., Bouza-Dominguez, J., Hebden, J. C., Arridge, S. R., Martinez-Celorio, R. A. (2003). Validity conditions for the radiative transfer equation. Journal of the Optical Society of America A: Optics, Image Science, and Vision20(11), 2046-2056

Miquel, M. E., Hill, D. L., Baker, E. J., Qureshi, S. A., Simon, R. D., Keevil, S. F., Razavi, R. S. (2003). Three- and four-dimensional reconstruction of intra-cardiac anatomy from two-dimensional magnetic resonance images. INT J CARDIOVASC IMAGING19(569-5794 (Print), 3), 239-254 Author URL

Noble, N. M., Hill, D. L., Breeuwer, M., Schnabel, J. A., Hawkes, D. J., Gerritsen, F. A., Razavi, R. (2003). Myocardial delineation via registration in a polar coordinate system. ACAD RADIOL10(076-6332 (Print), 12), 1349-1358 Author URL

Oliveira, J., Zhang, D., Spanlang, B., Buxton, B. (2003). Animating Scanned Human Models. Journal of WSCG11(2), 362-369

Parker, G. J. M., Alexander, D. C. (2003). Probabilistic Monte Carlo based mapping of cerebral connections utilising whole-brain crossing fibre information. Lecture Notes in Computer Science. ( Vol. 2732 pp.684-695). Springer. Author URL

Parker, G. J. M., Alexander, D. C. (2003). Probabilistic Monte-Carlo based mapping of cerebral connections utilising crossing fibre information. International Society for Magnetic Resonance in Medicine 11th Annual Scientific Meeting and Exhibition: 2003 Proceedings. ( pp.2162-2162). Berkeley, US: International Society for Magnetic Resonance in Medicine. Author URL Publisher URL

Prince, S., Kolehmainen, V., Kaipio, J. P., Franceschini, M. A., Boas, D., Arridge, S. R. (2003). Time-series estimation of biological factors in optical diffusion tomography. Physics in Medicine and Biology(48), 1491-1504 Author URL

Razavi, R. S., Hill, D. L., Muthurangu, V., Miquel, M. E., Taylor, A. M., Kozerke, S., Baker, E. J. (2003). Three-dimensional magnetic resonance imaging of congenital cardiac anomalies. Cardiology in the Young13(047-9511 (Print), 5), 461-465 Author URL

Razavi, R., Hill, D. L., Keevil, S. F., Miquel, M. E., Muthurangu, V., Hegde, S., Rhode, K., Barnett, M., van Vaals, J., Hawkes, D. J., Baker, E. (2003). Cardiac catheterisation guided by MRI in children and adults with congenital heart disease. The Lancet362(9399), 1877-1882 doi:10.1016/S0140-6736(03)14956-2. Author URL

Rhode, K. S., Hill, D. L., Edwards, P. J., Hipwell, J., Rueckert, D., Sanchez Ortiz, G., Hegde, S., Rahunathan, V., Razavi, R. (2003). Registration and tracking to integrate X-ray and MR images in an XMR facility. IEEE Transactions on Medical Imaging22(11), 1369-1378 doi:10.1109/TMI.2003.819275. Author URL

Schweiger, M., Arridge, S. R. (2003). Image reconstruction in optical tomography using local basis functions. J ELECTRON IMAGING12(4), 583-593 doi:10.1117/1.1586919.

Schweiger, M., Gibson, A. P., Arridge, S. R. (2003). Computational aspects of diffuse optical tomography. Computing in Science and Engineering5(6), 33-41 doi:10.1109/MCISE.2003.1238702.

Spanlang, B., Vassilev, T., Buxton, B. F. (2003). Virtual Try-on in a Department Store. Eurasia Tex.

Steed, A., Alexander, D., Cook, P., Parker, C. (2003). Visualizing Diffusion-Weighted MRI Data Using Collaborative Virtual Environment and Grid Technologies. Theory and Practice of Computer Graphics. IEEE Computer Society.

Stott, J. J., Culver, J. P., Arridge, S. R., Boas, D. (2003). Optode positional calibration in diffuse optical tomography. Applied Optics42, 3154-3162

Sukel, K. E., Catrambone, R., Essa, I. A., Brostow, G. J. (2003). Presenting movement in a computer-based dance tutor. 15, 433-452 doi:10.1207/S15327590IJHC1503_08. Publisher URL

Tahan, A., Buxton, B., Ruiz, M., Bougourd, J. (2003). Point Distribution Models of Human Body Shape from a Cononical Representation of 3D. 3D Modelling 2003.

Tanner, C., Schnabel, J. A., Castellano-Smith, A. D., Degenhard, A., Leach, M. O., Hose, D. R., Hill, D. L., Hawkes, D. J. (2003). Validation of nonrigid image registration using finite-element methods: application to breast MR images. IEEE Transactions on Medical Imaging22(2), 238-247 doi:10.1109/TMI.2002.808367. Author URL

Ward, J. J., McGuffin, L. J., Buxton, B. F., Jones, D. T. (2003). Secondary structure prediction with support vector machines. Bioinformatics19(13), 1650-1655 doi:10.1093/bioinformatics/btg223. Author URL

Yusof, R., Hebden, J. C., Gibson, A., Everdell, N., Austin, T., Meek, J., Arridge, S. R., Wyatt, J. S., Delpy, D. T. (2003). Validation of the use of homogenous reference phantoms for optical tomography of the neonatal brain. Proceedings of SPIE4955, 6-11

2002

Alexander, D. C., Barker, G. J., Arridge, S. R. (2002). Detection and modeling of non-Gaussian apparent diffusion coefficient profiles in human brain data. Magnetic Resonance in Medicine48(2), 331-340 doi:10.1002/mrm.10209. Author URL

Alexander, D. C., Barker, G. J., Arridge, S. R. (2002). Model selection in MR diffusion imaging. IVth International Workshop on Computational Problems in Electrical Engineering.

Alexander, D. C., Barker, G. J., Arridge, S. R. (2002). Tissue structure complexity maps from high angular resolution diffusion weighted magnetic resonance measurements. ISMRM 10th Scientific Meeting and Exhibition. Author URL

Alexander, D. C., Jansons, K. M. (2002). Spin echo attenuation to diffusion density: a general inversion for measurements on a sphere. ISMRM workshop on diffusion MRI: Biophysical issue (what can we measure?). ( pp.206-209).

Arridge, S. (2002). Diffusion tomography in dense media. In Pike, E. R., Sabatier, P. (Eds.). Scattering ( pp.920-936). Academic Press.

Atkinson, D., Bydder, M., Hajnal, J. V., Hill, D. L. H., Larkman, D. J. (2002). SMASH Navigators. ISMRM. ( pp.2395-).

Batchelor, P. G., Atkinson, D., Hill, D. L. G., Calamante, F., Connelly, A. (2002). Optimisation of Direction Schemes for Tensor Imaging: Rotational Invariance of the Normal Matrix. Workshop on Diffusion MRI: Biophysical Issues. ( pp.230-232).

Batchelor, P. G., Castellano Smith, A. D., Hill, D. L., Hawkes, D. J., Cox, T. C., Dean, A. F. (2002). Measures of folding applied to the development of the human fetal brain. IEEE TRANS MED IMAGING21(278-0062 (Print), 8), 953-965 Author URL

Batchelor, P. G., Hill, D. L. G., Atkinson, D., Calamante, F., Connelly, A. (2002). Fibre-tracking by solving the diffusion-convection equation. ISMRM.

Batchelor, P. G., Hill, D. L. G., Atkinson, D., Calamante, F., Connelly, A. (2002). Optimal choice of directions for Diffusion Tensor Imaging. ISMRM.

Bland, T., Hebden, J. C., Hillman, E. M. C., Gibson, A., Everdell, N., Delpy, D. T., Arridge, S. R., Douek, M. (2002). Optical Tomography of the Breast using a 32-Channel Time-Resolved Imager. OSA Biomedical Topic Meeting.

Cook, P. A., Alexander, D. C. (2002). Examination of White Matter Tissue Structures in the Human Brain. IVth International Workshop on Computational Problems in Electrical Engineering. ( pp.207-210).

Coulon, O., Hickman, S. J., Parker, G. J., Barker, G. J., Miller, D. H., Arridge, S. R. (2002). Quantification of spinal cord atrophy from magnetic resonance images via a B-spline active surface model. Magnetic Resonance in Medicine47(6), 1176-1185 Author URL

Curran, K. M., Alexander, D. C. (2002). Orientation matching for registration of diffusion tensor images. IVth International Workshop on Computational Problems in Electrical Engineering. ( pp.199-202).

Degenhard, A., Tanner, C., Hayes, C., Hawkes, D. J., Leach, M. O. (2002). Comparison between radiological and artificial neural network diagnosis in clinical screening. PHYSIOL MEAS23(967-3334 (Print), 4), 727-739 Author URL

Dias, M. B., Buxton, B. F. (2002). Integrated Shape and Pose Modelling. BMVC 2002: Proceedings of the 13th British Machine Vision Conference: 2nd-5th September 2002, Cardiff University. ( pp.827-836). Malvern, UK: The British Machine Vision Association. Publisher URL

Douros, I., Buxton, B. F. (2002). Three-Dimensional Surface Curvature Estimation using Quadric Surface Patches. Scanning 2002 Proceedings.

Gee, J. C., Alexander, D. C., Rivera, M., Duda, J. T. (2002). Non-rigid registration of diffusion tensor MR images. 2002 IEEE International Symposium on Biomedical Imaging: Proceedings. ( pp.477-480). Piscataway, US: IEEE Computer Society. Publisher URL

Gibson, A., Dehghani, H., Yusof, R. M., Hillman, E. M. C., Hebden, J. C., Schweiger, M., Arridge, S. R. (2002). . 'Optical Tomography of a Realistic Head-Shaped Phantom'. In OSA Biomedical Topical Meetings: Advances in Optical Imaging and Photon Migration, 7-10 April. ( pp.623-625). Washington DC, USA: Optical Society of America.

Gibson, A., Riley, J., Schweiger, M., Hebden, J. C., Arridge, S. R., Delpy, D. T. (2002). Optical Tomography of the Neonatal Head using a Patient-Specific Finite Element Mesh. Computational Problems in Electrical Engineering, Zakopane, Poland.

Griffin, L. D. (2002). Local image structure, metamerism, norms and natural image statistics. Perception31(3), 377-377 Publisher URL

Griffin, L. D. (2002). Males are 'noisy females' when it comes to reporting the psychological structure of the basic colours. Perception32(3), 387-387 Publisher URL

Hajnal, J. V., Bydder, M., Atkinson, D., Larkman, D. J., Hill, D. L. G. (2002). Data correction using SMASH navigation of k-space. Magnetic Resonance Materials in Biology, Physics and Medicine (MAGMA)15(S1), 53-

Hawkes, D. J., Spendley, D. G., Alfaham, M. (2002). Hypothesis waiting for proof: unwrapping neonates for transfer. ARCH DIS CHILD FETAL NEONATAL ED87(359-2998 (Print), 3), F232- Author URL

Hebden, J. C., Bland, T., Hillman, E. M. C., Gibson, A., Everdell, N., Delpy, D. T., Arridge, S. R., Douek, M. (2002). . 'Optical Tomography of the Breast using a 32-Channel Time-Resolved Imager'. In OSA Biomedical Topical Meetings: Advances in Optical Imaging and Photon Migration, 7-10 April. ( pp.187-189). Washington DC, USA: Optical Society of America.

Hebden, J. C., Bland, T., Hillman, E. M. C., Gibson, A., Everdell, N., Delpy, D. T., Arridge, S., Douek, M. (2002). Optical tomography of the breast using a 32-channel time-resolved imager. Optical Society of America Technical Digest. ( pp.187-189).

Hebden, J. C., Gibson, A., Yusof, R. M., Everdell, N., Hillman, E. M. C., Delpy, D. T., Arridge, S. R., Austin, T., Meek, J. H., Wyatt, J. S. (2002). Three-dimensional optical tomography of the premature infant brain. PHYS MED BIOL47(23), 4155-4166

Hebden, J. C., Hillman, E. M. C., Gibson, A., Everdell, N., Yusof, R. M., Delpy, D. T., Arridge, S. R., Austin, J. H. (2002). . 'Time Resolved Optical Imaging of the Newborn Infant Brain: Initial Clinical Results'. In OSA Biomedical Topical Meetings: Advances in Optical Imaging and Photon Migration, 7-10 April. ( pp.587-589). Washington DC, USA: Optical Society of America.

Hill, D. L., Surrey, M. W., Danzer, H. C. (2002). Is gender selection an appropriate use of medical resources? J ASSIST REPROD GENET19(058-0468 (Print), 9), 438-439 Author URL

Hillman, E. M. C., Arridge, S. R., Hebden, J. C., Delpy, D. T. (2002). . 'Oxygen Saturation and Blood-Volume Derivation from Multi-Wavelength Time-Resolved Optical Tomography Data'. In OSA Biomedical Topical Meetings: Advances in Optical Imaging and Photon Migration, 7-10 April. ( pp.599-601). Washington DC, USA: Optical Society of America.

Holden, M., Schnabel, J. A., Hill, D. L. (2002). Quantification of small cerebral ventricular volume changes in treated growth hormone patients using nonrigid registration. IEEE TRANS MED IMAGING21(278-0062 (Print), 10), 1292-1301 Author URL

Hutton, T. J., Buxton, B. F., Hammond, P. (2002). . Proceedings of the International Workshop on Growth and Motion in 3D Medical Images, 7th European Conference on Computer Vision, Copenhagen, Denmark. ( pp.1-7). Copenhagen, Denmark: European Conference on Computer Vision.

Hutton, T. J., Buxton, B. F., Hammond, P. (2002). Estimating Average Growth Trajectories in Shape-Space using Kernel Smoothing. Proceedings of the International Workshop on Growth and Motion in 3D Medical Images, European Conference on Computer Vision. Copenhagen, Denmark. June 1. ( pp.1-7).

Jannin, P., Fitzpatrick, J. M., Hawkes, D. J., Pennec, X., Shahidi, R., Vannier, M. W. (2002). Validation of medical image processing in image-guided therapy. IEEE TRANS MED IMAGING21(278-0062 (Print), 12), 1445-1449 Author URL

Jansons, K. M., Alexander, D. C. (2002). Spin echo attenuation to diffusion density: a general inversion for measurements on a sphere. ISMRM 10th Scientific Meeting and Exhibition.

Jones, D. K., Alexander, D. C., Williams, S. C. R., Howard, R. J. (2002). Visualizing inter-subject coherence of axonal fiber orientation by diffusion tensor MRI. ISMRM 10th Scientific Meeting and Exhibition.

Jones, D. K., Catani, M., Alexander, D. C., Howard, R. J. (2002). Diffusion tensor fiber tractography on a population averaged brain. International Society for Magnetic Resonance in Medicine: 10th Scientific Meeting and Exhibition. Berkeley, US: International Society for Magnetic Resonance in Medicine. Author URL Publisher URL

Jones, D. K., Griffin, L. D., Alexander, D. C., Catani, M., Horsfield, M. A., Howard, R., Williams, S. C. R. (2002). Spatial Normalization and Averaging of Diffusion Tensor MRI Data Sets. NeuroImage17(2), 592-617 doi:10.1016/S1053-8119(02)91148-1. Author URL

Jones, D. K., Griffin, L. D., Alexander, D. C., Catani, M., Horsfield, M. A., Howard, R., Williams, S. C. R. (2002). Spatial normalization and averaging of diffusion tensor MRI data sets. NEUROIMAGE17(2), 592-617 doi:10.1006/nimg.2002.1148.

Jones, D. K., Griffin, L. D., Alexander, D. C., Williams, S. C. R., Howard, R. J. (2002). Characterising a population distribution of diffusion tensors. ISMRM 10th Scientific Meeting and Exhibition. Author URL

Langdon, W. B., Barrett, S. J., Buxton, B. F. (2002). Combining decision trees and neural networks for drug discovery. Genetic Programming: 5th European Conference, EuroGP 2002 Kinsale, Ireland, April 3–5, 2002, Proceedings. ( Vol. 2278 pp.76-89). Berlin, Germany: Springer-Verlag. Publisher URL

McLeish, K., Hill, D. L. H., Atkinson, D., Blackall, J. M., Razavi, R. S. (2002). A Study of the Motion and Deformation of the Heart due to Respiration. ISMRM. ( pp.1633-).

McLeish, K., Hill, D. L., Atkinson, D., Blackall, J. M., Razavi, R. (2002). A study of the motion and deformation of the heart due to respiration. IEEE TRANS MED IMAGING21(278-0062 (Print), 9), 1142-1150 doi:10.1109/TMI.2002.804427.

Miquel, M. E., Atkinson, D., Clarck, L., Chandrashekara, R., Rueckert, D., Hill, D. L. G., Razavi, R. S. (2002). Non-invasive measurement of left ventricular pressure during systolic ejection period using MR function and tagged images. ISMRM. ( pp.1657-).

Oliveira, J., Buxton, B. F. (2002). Non-linear Simplification of Scanned Models. Proceedings of the Numérisation 3D - SCANNING. Paris, France.

Penney, G. P., Little, J. A., Weese, J., Hill, D. L., Hawkes, D. J. (2002). Deforming a preoperative volume to represent the intraoperative scene. COMPUT AIDED SURG7(092-9088 (Print), 2), 63-73 Author URL

Prince, S. J. D., Pointon, A. D., Cumming, B. G., Parker, A. J. (2002). Quantitative analysis of the responses of V1 neurons to horizontal disparity in dynamic random-dot stereograms. J NEUROPHYSIOL87(1), 191-208

Prince, S. J. D., Xu, K., Cheok, A. D. (2002). Augmented reality camera tracking with homographies. IEEE COMPUT GRAPH22(6), 39-45

Prince, S., Xu, K., Cheok, A. (2002). Robust camera tracking for augmented reality based on planar homographies. IEEE Computer Graphics and Applications22, 39-45

Ruiz, M., Buxton, B. F., Douros, I., Treleaven, P. C. (2002). Web-based Software Tools for 3D Body Database Access and Shape Analysis. Scanning 2002 Proceedings.

Southall, B., Hague, T., Marchant, J. A., Buxton, B. F. (2002). An autonomous crop treatment robot: Part I. A Kalman filter model for localization and crop/weed classification. International Journal of Robotics Research21(1), 61-74 doi:10.1177/027836402320556485.

Tanner, C., Schnabel, J. A., Castellano-Smith, A. D., Sonoda, L. I., Hill, D. L., Hawkes, D. J., Degenhard, A., Hayes, C., Leach, M. O., Hose, D. R. (2002). Comparison of biomechanical breast models: a case study. Proceedings of SPIE. ( Vol. 4684 pp.1807-1818). Bellingham, US: SPIE - Society of Photographic Instrumentation Engineers. Publisher URL

Tanner, C., Schnabel, J. A., Degenhard, A., Castellano-Smith, A. D., Hayes, C., Leach, M. O., Hose, D. R., Hill, D. L. G., Hawkes, D. J. (2002). Validation of volume-preserving non-rigid registration: Application to contrast-Enhanced MR-mammography. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2002: 5th International Conference Tokyo, Japan, September 25–28, 2002: Proceedings, Part I. ( Vol. 2488 pp.307-314). Berlin / Heidelberg, Germany: Springer-Verlag. Publisher URL

Ye, X., Noble, J. A., Atkinson, D. (2002). 3D Freehand Echocardiography for Automatic Left Ventricle Reconstruction and Analysis based on Multiple Acoustic Windows. IEEE Transactions on Medical Imaging21(9), 1051-1058

2001

Alexander, D. C., Buxton, B. F. (2001). Statistical modeling of colour data. International Journal of Computer Vision44(2), 87-109 doi:10.1023/A:1011870913626. Author URL

Alexander, D. C., Pierpaoli, C., Basser, P. J., Gee, J. C. (2001). An algorithm for preservation of orientation during non-rigid warps of DT-MR images. Proceedings of the Interational Society For Magnetic Resonance in Medicine. ( Vol. 9 pp.791-791). Berkeley, US: Interational Society For Magnetic Resonance in Medicine. Author URL Publisher URL

Alexander, D. C., Pierpaoli, C., Basser, P. J., Gee, J. C. (2001). Spatial transformations of diffusion tensor magnetic resonance images. IEEE Transactions on Medical Imaging20(11), 1131-1139 doi:10.1109/42.963816. Author URL

Atkinson, D., Burcher, M., Declerck, J., Noble, J. A. (2001). Respiratory Motion Compensation for 3D Freehand Echocardiography. Ultrasound in Medicine and Biology27(12), 1615-1620 doi:10.1016/S0301-5629(01)00483-5.

Atkinson, D., Calamante, F., Hill, D. L. G., Connelly, A. (2001). Two dimensional navigator echo correction in DWI: assessment of the use of multiple reacquisition at high b-value. ISMRM. ( pp.1552-).

Atkinson, D., Hill, D. L. G. (2001). Automatic Motion Correction Using Prior Knowledge. ISMRM. ( pp.747-).

Atkinson, D., Hill, D. L. G. (2001). Reconstruction After Irregular and Under Sampling Due to Rotational Motion. ISMRM Workshop Florida 2001- 'Minimum MR Data Acquisition Methods: Making More With Less'. ( pp.7-10).

Batchelor, P. G., Atkinson, D., Hill, D. L. G. (2001). Reconstruction of Tensor and Vector Data from Diffusion Tensor MRI. Applied Mathematics in our Changing World.

Batchelor, P. G., Hill, D. L. G., Calamante, F., Atkinson, D. (2001). Study of Connectivity in the Brain Using the Full Diffusion Tensor from MRI. IPMI. ( pp.121-133).

Boas, D. A., Gaudette, T., Arridge, S. R. (Eds.) (2001). Simultaneous imaging and optode calibration with diffuse optical tomography. Optics express8(5), 263-270

Brostow, G. J., Essa, I. (2001). Image-based motion blur for stop motion animation. SIGGRAPH 2001 CONFERENCE PROCEEDINGS. ( pp.561-566). ASSOC COMPUTING MACHINERY.

Burbidge, R., Buxton, B. F. (2001). An introduction to support vector machines for data mining. Proc. 12th Conference Young Operational Research (YOR12), Nottingham, UK. ( pp.3-15).

Burbidge, R., Trotter, M., Buxton, B. F., Holden, S. (2001). STAR - Sparsity Through Automated Rejection. Connectionist Models of Neurons, Learning Processes, and Artificial Intelligence: 6th International Work-Conference on Artificial and Natural Neural Networks, IWANN 2001 Granada, Spain, June 13–15, 2001: Proceedings, Part 1. ( Vol. 2084 pp.653-660). Berlin/Heidelberg, Germany: Springer-Verlag. Publisher URL

Burbidge, R., Trotter, M., Holden, S., Buxton, B. F. (Eds.) (2001). Drug design by machine learning: support vector machines for pharmaceutical data. Computers and Chemistry26(1), 4-15

Buxton, B. F., Langdon, W. B., Barrett, S. J. (2001). Data fusion by intelligent classifier combination. MEAS CONTROL-UK34(8), 229-234

Buxton, B. F., Langdon, W. B., Barrett, S. J. (Eds.) (2001). Data fusion by intelligent classifier combination. Measurement and Control34(8), 235-239

Clarkson, M. J., Rueckert, D., Hill, D. L. G., Hawkes, D. J. (2001). Using photo-consistency to register 2D optical images of the human face to a 3D surface model. IEEE Transactions on Pattern Analysis and Machine Intelligence23(11), 1266-1280

Coulon, O., Alexander, D. C., Arridge, S. R. (2001). A Regularization Scheme for Diffusion Tensor Magnetic Resonance Images. LNCS 2082. ( pp.92-105). Springer-Verlag.

Coulon, O., Alexander, D. C., Arridge, S. R. (2001). Principal diffusion direction field regularization for diffusion tensor magnetic resonance images. Proc. ISMRM'2001, International Society for Magnetic Resonance in Medicine, Glasgow.

Coulon, O., Alexander, D. C., Arridge, S. R. (2001). Tensor field regularisation for DT-MR images. Proc. MIUA'01, British Conference on Medical Image Understanding and Analysis, Birmingham, UK.

Coulon, O., Parker, G. J. M., Hickman, S. J., Arridge, S. R. (2001). Quantification of spinal cord atrophy via an active surface model. International Society for Magnetic Resonance in Medicine 9th Annual Scientific Meeting and Exhibition: 2001 Proceedings. ( pp.819-819). Berkeley, US: International Society for Magnetic Resonance in Medicine. Publisher URL

Degenhard, A., Tanner, C., Hayes, C., Hawkes, D. J., Leach, M. O. (2001). Pre-processed image reconstruction applied to breast and brain MR imaging. PHYSIOL MEAS22(967-3334 (Print), 3), 589-604 Author URL

Dehghani, H., Hillman, E. M. C., Schweiger, M., Arridge, S. R., Delpy, D. T. (2001). Optical tomography of a 3D multilayered head model. Proceedings of SPIE4250, 45-52

Dehmeshki, J., Ruto, A. C., Arridge, S., Silver, N. C., Miller, D. H., Tofts, P. S. (2001). Analysis of MTR histograms in multiple sclerosis using principal components and multiple discriminant analysis. Magnetic Resonance in Medicine46(3), 600-609

Edwards, P. J., Hawkes, D. J., Penney, G. P., Clarkson, M. J. (2001). Guiding Therapeutic Proceedures. In Hajnal, J. V., Hill, D. L. G., Hawkes, D. J. (Eds.). Medical Image Registration ( pp.253-278). CRC.

Griffin, L. D. (2001). Histograms of infinitesimal neighbourhoods. In Proc. Scale Space '01, LNCS vol. 2106 ( pp.326-334).

Hebden, J. C., Veenstra, H., Dehghani, H., Hillman, E. M., Schweiger, M., Arridge, S. R., Delpy, D. T. (Eds.) (2001). Three-dimensional time-resolved optical tomography of a conical breast phantom. Applied Optics40, 3278-3287

Hickman, S., Coulon, O., Parker, G. J., Barker, G. J., Stevenson, V. L., Chard, D. T., Arridge, S. R., Thompson, A. J., Miller, D. H. (2001). Cervical spinal cord volume estimation using an active surface method: a amgnetic resonance imaging study in multiple sclerosis. Proc. ECTRIMS 2001, European Committee for Treatment and Research in Multiple Sclerosis.

Hill, D. L. G., Batchelor, P. G. (2001). Registration Methodology-Algorithms,. In Hajnal, J., Hill, D. L. G., Hawkes, D. (Eds.). Medical Image Registration, ( ). CRC.

Hill, D. L., Batchelor, P. G., Holden, M., Hawkes, D. J. (2001). Medical image registration. PHYS MED BIOL46(031-9155 (Print), 3), R1-45

Hillman, E. M. C., Dehghani, H., Hebden, J. C., Arridge, S. R., Schweiger, M., Delpy, D. T., Chance, B. (2001). Differential Imaging in Heterogeneous Media: Limitations of Linearisation Assumptions in Optical Tomography. Bellingham4240, 327-338

Hillman, E. M. C., Dehghani, H., Hebden, J. C., Arridge, S. R., Schweiger, M., Delpy, D. T., Schmidt, F. E. W. (2001). Time resolved optical tomography of the human forearm. Physics in Medicine and Biology46, 1117-1130 Author URL

Hillman, E. M., Dehghani, H., Hebden, J. C., Arridge, S. R., Schweiger, M., Delpy, D. T. (2001). Differential imaging in heterogeneous media: limitations of linearization assumptions in optical tomography. Proc. SPIE 4250. ( pp.327-338).

Hutton, T. J., Buxton, B. F., Hammond, P. (2001). Dense surface point distribution models of the human face. Proceedings of the IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA 2001), 9-10 December 2001, Kauai, Hawaii. ( pp.153-160). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

King, A. P., Batchelor, P. G., Penney, G. P., Blackall, J. M., Hill, D. L. G., Hawkes, D. J. (2001). Estimating Sparse Deformation Fields Using Multiscale Bayesian Priors and 3-D Ultrasound. IPMI.

Langdon, W. B., Barrett, S. J., Buxton, B. F. (2001). Genetic programming for combining neural networks for drug discovery. Proc. WSC6, 2001.

Langdon, W. B., Barrett, S. J., Buxton, B. F. (2001). Genetic programming for combining neural networks. Proc. WSC6, 2001.

Langdon, W. B., Buxton, B. F. (2001). Evolving receiver operating characteristics for data fusion. Proc. EuroGP 2001. ( pp.87-96).

Langdon, W. B., Buxton, B. F. (2001). Genetic Programming for Improved Receiver Operating Characteristics. Multiple Classifier Systems: Second International Workshop, MCS 2001 Cambridge, UK, July 2–4, 2001: Proceedings. ( Vol. 2096 pp.68-77). Berlin/Heidelberg, Germany: Springer-Verlag. Publisher URL

Langdon, W. B., Buxton, B. F. (2001). Genetic programming for combining classifiers. GECCO-2001: proceedings of the Genetic and Evolutionary Computation Conference : a joint meeting of the sixth annual Genetic Programming Conference (GP-2001) and the tenth International Conference on Genetic Algorithms (ICGA-2001): July 7-11, 2001, San Francisco, California. ( pp.66-73). San Francisco: Morgan Kaufmann Publishers. Publisher URL

McLeish, K., Atkinson, D., Hill, D. L. G., Keevil, S. F. (2001). Inverse MRI:Imaging a Freely Rotating Object. ISMRM. ( pp.731-).

Oliveira, J., Buxton, B. F. (2001). Light weight virtual humans. Proc. Eurographics-UK 2001,London.

Oliveira, J., Buxton, B. F. (2001). Light-weight virtual humans. Proc. of EUROGRAPHICS-UK 2001. ( pp.45-52).

Penney, G. P., Batchelor, P. G., Hill, D. L., Hawkes, D. J., Weese, J. (2001). Validation of a two- to three-dimensional registration algorithm for aligning preoperative CT images and intraoperative fluoroscopy images. MED PHYS28(094-2405 (Print), 6), 1024-1032 Author URL

Penney, G. P., Edwards, P. J., King, A. P., Blackall, J. M., Batchelor, P. G., Hawkes, D. J. (2001). Stochastic Iterative Closest Point Algorithm (stochastICP). MICCAI.

Riley, J. D., Arridge, S. R., Chrysanthou, Y., Dehghani, H., Hillman, E. M. (2001). The Radiosity Diffusion model in 3D. Proc. SPIE 4431.

Ripoll, J., Nieto-Vesperinas, M., Arridge, S. R. (2001). Effect of roughness in nondiffusive regions within diffusive media. J OPT SOC AM A18(4), 940-947

Schweiger, M., Arridge, S. R. (2001). Fast 3-D image reconstruction in optical tomography using a coarse-grain parallelization strategy. Proc. SPIE 4250. ( pp.93-100).

Tanner, C., Degenhard, A., Schnabel, J. A., Smith, A. C., Hayes, C., Sonoda, L. I., Leach, M. O., Hose, D. R., Hill, D. L. G., Hawkes, D. J. (2001). A method for the comparison of biomechanical breast models. IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, MMBIA 2001. ( pp.11-18). Los Alamitos, US: IEEE Computer Society. Publisher URL

Trotter, M., Buxton, B. F., Holden, S. (Eds.) (2001). Support vector machines in combinatorial chemistry. Measurement and Control34(8), 235-239

Wickramaratna, J., Holden, S. B., Buxton, B. F. (2001). Performance degradation in boosting. Multiple Classifier Systems: Second International Workshop, MCS 2001 Cambridge, UK, July 2–4, 2001: Proceedings. ( Vol. 2096 pp.11-21). Berlin/Heidelberg, Germany: Springer-Verlag. Publisher URL

2000

Alexander, D. C., Gee, J. C. (2000). Elastic matching of diffusion tensor images. Computer Vision and Image Understanding77(2), 233-250

Alexander, D. C., Gee, J. C. (2000). Spatial transformations for registration of DT-MRIs. Proc. Medical Image Understanding and Analysis, London. ( pp.203-206).

Alexander, D. C., Pierpaoli, C., Basser, P. J., Gee, J. C. (2000). Techniques for spatial normalisation of diffusion tensor images. Proc. SPIE Conference on Medical Imaging, (Image Processing), San Diego. ( Vol. 1 pp.470-479).

Arridge, S. R. (2000). Linear and non-linear methods in optical tomography. BIOMEDICAL TOPICAL MEETINGS, TECHNICAL DIGEST. ( Vol. 38 pp.495-497). OPTICAL SOC AMERICA.

Arridge, S. R., Dehghani, H., Schweiger, M., Okada, E. (2000). The finite element model for the propagation of light in scattering media: A direct method for domains with nonscattering regions. Medical Physics27(1), 252-264

Arridge, S. R., Hebden, J. C., Schwinger, M., Schmidt, F. E. W., Fry, M. E., Hillman, E. M. C., Dehghani, H., Delpy, D. T. (2000). A method for three-dimensional time-resolved optical tomography. INT J IMAG SYST TECH11(1), 2-11

Atkinson, D., Porter, D. A., Hill, D. L., Calamante, F., Connelly, A. (2000). Sampling and reconstruction effects due to motion in diffusion-weighted interleaved echo planar imaging. MAGN RESON MED44(1), 101-109

Castellano Smith, A. D., Batchelor, P. G., Chitnis, X. A., Hill, D. L. G., Sharma, T. (2000). Cortical Shape Differences between Schizophrenics and Normals. 10th Biennial Winter Workshop on Schizophrenia.

Castellano Smith, A. D., Batchelor, P. G., Hill, D. L. G., Dean, A. D., Cox, T., Hawkes, D. J. (2000). The Shape of the Developing Foetal Cortex from MR Images. ISMRM.

Castellano Smith, A. D., Batchelor, P. G., Hill, D. L. G., Dean, A. D., Cox, T., Hawkes, D. J. (2000). he Shape of the Developing Foetal Cortex from MR Images. MIUA.

Coulon, O., Arridge, S. R. (2000). Dual echo MR image processing using multi-spectral probabilistic diffusion coupled with shock filters. Proc. of the British Conference on Medical Image Understanding and Analysis, (MIUA 2000), London. ( pp.141-144).

Dehghani, H., Arridge, S. R., Schweiger, M., Delpy, D. T. (2000). Image reconstruction in the presence of void regions. OSA Technical Digest, Biomedical Topical Meetings, Washington DC. ( pp.351-353).

Dehghani, H., Arridge, S. R., Schweiger, M., Delpy, D. T. (2000). Optical tomography in the presence of void regions. Journal of the Optical Society of America A: Optics, Image Science, and Vision17(9), 1659-1670 doi:10.1364/JOSAA.17.001659. Author URL

Denton, E. R., Holden, M., Christ, E., Jarosz, J. M., Russell-Jones, D., Goodey, J., Cox, T. C., Hill, D. L. (2000). The identification of cerebral volume changes in treated growth hormone-deficient adults using serial 3D MR image processing. J COMPUT ASSIST TOMOGR24(363-8715 (Print), 1), 139-145 Author URL

Griffin, L. D. (2000). Psychological Colour Space is Physical Colour Space. Perception29(1), 119-119 Publisher URL

Hansard, M. E., Buxton, B. (2000). Parametric view-synthesis. Proc.of the 6th European Conference on Computer Vision, (ECCV 2000), Dublin. ( pp.191-202). Berlin: Springer-Verlag.

Hebden, J. C., Schmidt, F. E. W., Hillman, E. M. C., Arridge, S. R., Schweiger, M., Delpy, D. T. (2000). . Inter-Institute Workshop on In Vivo Optical Imaging at the NIH. ( pp.167-171). Washington DC: Optical Society of America.

Hebden, J. C., Schmidt, F. E. W., Hillman, E. M. C., Arridge, S. R., Schweiger, M., Delpy, D. T. (2000). Optical tomography of the human forearm. PROCEEDINGS OF INTER-INSTITUTE WORKSHOP ON IN VIVO OPTICAL IMAGING AT THE NIH. ( pp.167-171). OPTICAL SOC AMERICA.

Hill, D. L., Smith, A. D., Simmons, A., Maurer, C. R., Jr, C., T C, E., R, B., M, H., D J, P., C, E. (2000). Sources of error in comparing functional magnetic resonance imaging and invasive electrophysiological recordings. J NEUROSURG93(022-3085 (Print), 2), 214-223 Author URL

Hillman, E. M. C., Hebden, J. C., Schmidt, F. E. W., Arridge, S. R., Schweiger, M., Dehghani, H., Delpy, D. T. (2000). Calibration techniques and datatype extraction for time-resolved optical tomography. REV SCI INSTRUM71(9), 3415-3427

Hillman, E. M. C., Hebden, J. C., Schmidt, F. E., Arridge, S. R., Fry, M. E., Schweiger, M., Delpy, D. T. (2000). Initial clinical testing of the UCL 32 channel time-resolved instrument for optical tomography. Biomedical Optical Spectroscopy and Diagnostics. ( Vol. 38 pp.100-102). Washington, US: Optical Society of America. Publisher URL

Hillman, E. M., Hebden, J. C., Schmidt, F. E., Arridge, S. R., Fry, M. E., Schweiger, M., Delpy, D. T. (2000). Initial clinical testing of the UCL 32 channel time-resolved instrument for optical tomography. OSA Technical Digest, Biomedical Topical Meetings (OSA, Washington DC). ( pp.100-102).

Holden, M., Hill, D. L., Denton, E. R., Jarosz, J. M., Cox, T. C., Rohlfing, T., Goodey, J., Hawkes, D. J. (2000). Voxel similarity measures for 3-D serial MR brain image registration. IEEE TRANS MED IMAGING19(278-0062 (Print), 2), 94-102

Kashio, Y., Ono, M., Firbank, M., Schweiger, M., Arridge, S. R., Okada, E. (2000). Investigation of the relationship between position of brain activity and change in optical density for NIR imaging. PHOTON MIGRATION, DIFFUSE SPECTROSCOPY AND OPTICAL COHERENCE TOMOGRAPHY: IMAGING AND FUNCTIONAL ASSESSMENT. ( Vol. 1 pp.83-90). SPIE-INT SOC OPTICAL ENGINEERING.

Kolehmainen, V., Arridge, S. R., Vauhkonen, M., Kaipio, J. P. (2000). Simultaneous reconstruction of internal tissue region boundaries and coefficients in optical diffusion tomography. Physics in Medicine and Biology45(11), 3267-3284

Kolehmainen, V., Vauhkonen, M., Kaipio, J. P., Arridge, S. R. (2000). Recovery of piecewise constant coefficients in optical diffusion tomography. Optics express7(13), 468-480

O'Brien, J. F., Bodenheimer, R. E., Brostow, G. J., Hodgins, J. K. (2000). Automatic joint parameter estimation from magnetic motion capture data. GRAPHICS INTERFACE 2000, PROCEEDINGS. ( pp.53-60). CANADIAN INFORMATION PROCESSING SOC.

Ono, M., Kashio, Y., Schweiger, M., Dehghani, H., Arridge, S. R., Firbank, M., Okada, E. (2000). Topographic distribution of photon measurement density functions on the brain surface by hybrid radiosity-diffusion method. OPT REV7(5), 426-431

Pineda, A. R., Barrett, H. H., Arridge, S. R. (2000). Spatially varying detectability for optical tomography. MEDICAL IMAGING 2000: PHYSICS OF MEDICAL IMAGING. ( Vol. 1 pp.77-83). SPIE-INT SOC OPTICAL ENGINEERING.

Prince, S. J. D., Eagle, R. A. (2000). Weighted directional energy model of human stereo correspondence. VISION RES40(9), 1143-1155

Riley, J., Dehghani, H., Schweiger, M., Arridge, S. R., Ripoli, J., Nieto-Vesperinas, M. (2000). 3D optical tomography in the presence of void regions. Optics express7(13), 462-467

Ripoll, J., Arridge, S. R., Dehghani, H., Nieto-Vesperinas, M. (2000). Boundary conditions for light propagation in diffusive media with nonscattering regions. Journal of the Optical Society of America A: Optics, Image Science, and Vision17(9), 1671-1681

Ripoll, J., Arridge, S. R., Nieto-Vesperinas, M. (2000). Effect of roughness in non-diffusive regions within diffusive media. PHOTON MIGRATION, DIFFUSE SPECTROSCOPY AND OPTICAL COHERENCE TOMOGRAPHY: IMAGING AND FUNCTIONAL ASSESSMENT. ( Vol. 1 pp.185-195). SPIE-INT SOC OPTICAL ENGINEERING.

Schmidt, F. E. W., Hebden, J. C., Hillman, E. M. C., Fry, M. E., Schweiger, M., Delpy, D. T., Arridge, S. R., Dehghani, H. (2000). Multiple-slice imaging of a tissue-equivalent phantom by use of time-resolved optical tomography. Applied Optics39(19), 3380-3387 Author URL

Southall, B., Buxton, B. F., Marchant, J. A., Hague, T. (2000). On the performance characterisation of image segmentation algorithms: a case study. Computer Vision - ECCV 2000: 6th European Conference on Computer Vision Dublin, Ireland, June 26–July 1, 2000: Proceedings, Part II. ( Vol. 1843 pp.351-365). Berlin/Heidelberg, Germany: Springer-Verlag. Publisher URL

Tanner, C., Schnabel, A., Chung, D., Clarkson, M. J., Rueckert, D., Hill, D. L. G., Hawkes, D. J. (2000). Volume and shape preservation of enhancing lesions when applying non-rigid registration to a time series of contrast enhancing MR breast images. LNCS. ( Vol. 1935 pp.327-337).

1999

Alexander, D. C. (1999). Advances in daylight statistical colour modelling. Proceedings: 1999 IEEE Computer Society Conference on Computer Vision and Pattern Recognition: June 23-25, 1999: Fort Collins, Colorado. ( Vol. 1 pp.313-318). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

Alexander, D. C., Buxton, B. F. (1999). An empirical comparison of statistical chromaticity models. Seventh International Conference on Image Processing and Its Applications, 13 - 15 July 1999. ( Vol. 1 pp.220-224). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

Alexander, D. C., Gee, J. C., Bajcsy, R. (1999). Elastic matching of diffusion tensor MRIs. Proceedings: 1999 IEEE Computer Society Conference on Computer Vision and Pattern Recognition: June 23-25, 1999, Fort Collins, Colorado. ( Vol. 1 pp.1244-1244). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

Alexander, D. C., Gee, J. C., Bajcsy, R. (1999). Strategies for Data Reorientation during Non-rigid Warps of Diffusion Tensor Images. Medical Image Computing and Computer-Assisted Intervention - MICCAI’99: Second International Conference, Cambridge, UK, September 19-22, 1999: Proceedings. ( Vol. 1679 pp.463-472). Berlin/Heidelberg, Germany: Springer-Verlag. Author URL Publisher URL

Alexander, D. C., Gee, J. C., Bajcsy, R. (1999). Transformation of and similarity measures for diffusion tensor MRIs. Workshop on Biomedical Image Registration (WBIR).

Alexander, D. C., Gee, J., Bajcsy, R. (1999). Similarity measures for matching diffusion tensor images. BMVC 99: Proceedings of the 10th British Machine Vision Conference, 13-16 September 1999, University of Nottingham. ( pp.93-102). Malvern, UK: British Machine Vision Association. Author URL Publisher URL

Amos, G., Buxton, B. F. (1999). Positioning human body models with Lagrange multipliers. Digital Human Modeling for Design and Engineering International Conference and Exposition: The Hague, The Netherlands, May 18 - 20, 1999. Warrendale, US: SAE International. Publisher URL

Arridge, S. R. (1999). Optical tomography in medical imaging. INVERSE PROBL15(2), R41-R93

Arridge, S. R. (Ed.) (1999). Optical tomography in medical imaging. Topical Review Inverse Problems15, R14-R93

Arridge, S. R., Schweiger, M. (1999). A General Framework for Iterative Reconstruction Algorithms in Optical Tomography, Using a Finite Element Method. In Boergers, C., Natterer, F. (Eds.). Computational Radiology and Imaging - Therapy and Diagnostics ( pp.45-70). New York, USA:Springer.

Atkinson, D., Hill, D. L., Stoyle, P. N., Summers, P. E., Clare, S., Bowtell, R., Keevil, S. F. (1999). Automatic compensation of motion artifacts in MRI. Magnetic Resonance in Medicine41, 163-170 Author URL

Batchelor, P. G., Castellano Smith, A. D., Hill, D. L. G. (1999). Proper Scales of Shapes-A Curved Scale Space. Second International Conference on Scale-Space Theories in Computer Vision. ( pp.375-386).

Brostow, G. J., Essa, I. A. (1999). Motion based Decompositing of Video. ICCV. ( pp.8-13). Publisher URL

Casique, M. V., Arridge, S. R. (1999). Non-linear Registration using a Finite Element Method. BMVC. British Machine Vision Association. Publisher URL

Dehghani, H., Delpy, D. T., Arridge, S. R. (1999). Photon migration in non-scattering tissue and the effects on image reconstruction. Physics in Medicine and Biology44(12), 2897-2906 Author URL

Dekker, L., Douros, I., Buxton, B. F., Treleaven, P. (1999). Building Symbolic Information for 3D Human Body Modeling from Range Data. Proc. of the Second International Conference on 3-D Digital Imaging and Modelling, Ottawa, Canada. ( pp.388-397). Los Alamitos, CA: IEEE.

Denton, E. R., Sonoda, L. I., Rueckert, D., Rankin, S. C., Hayes, C., Leach, M. O., Hill, D. L., Hawkes, D. J. (1999). Comparison and evaluation of rigid, affine, and nonrigid registration of breast MR images. J COMPUT ASSIST TOMOGR23(363-8715 (Print), 5), 800-805 Author URL

Douros, I., Dekker, L., Buxton, B. F. (1999). An improved algorithm for reconstruction of the surface of the human body from 3D scanner data using local B-spline patches. Proceedings of the IEEE International Workshop on Modelling People, September 20, 1999, Kerkyra, Greece. ( pp.29-36). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

Douros, I., Dekker, L., Buxton, B. F. (1999). Reconstruction of the surface of the human body from 3D scanner data using B-splines. Proceedings of SPIE. ( Vol. 3640 pp.234-245). Bellingham, US: SPIE - The International Society for Optical Engineering. Publisher URL

Griffin, L. D. (1999). Empirical assessment of colour symmetries. Behavioral and Brain Sciences22(6), 952-953

Hebden, J. C., Schmidt, F. E. W., Fry, M. E., Schweiger, M., Hillman, E. M. C., Delpy, D. T., Arridge, S. (1999). Simultaneous reconstruction of absorption and scattering images by multichannel measurement of purely temporal data. Optics Letters24, 534-536

Holden, M., Hill, D. L. G., Denton, E. R. E., Jarosz, J. M., Cox, T. C. S., Hawkes, D. J. (1999). Voxel similarity measures for 3D serial MR brain image registration. INFORMATION PROCESSING IN MEDICAL IMAGING, PROCEEDINGS. ( Vol. 1613 pp.472-477). SPRINGER-VERLAG BERLIN.

Kennedy, D. M., Buxton, A. F., Gilby, J. H. (1999). Application of the total least squares procedure to linear view interpolation. BMVC 99: proceedings of the 10th British Machine Vision Conference, 13-16 September 1999, University of Nottingham. ( Vol. 1 pp.305-314). Malvern, UK: British Machine Vision Association. Publisher URL

Kolehmainen, V., Arridge, S. R., Lionheart, W. R. B., Vauhkonen, M., Kaipio, J. P. (Eds.) (1999). Recovery of region boundaries of piecewise constant coefficients of an elliptic PDE from boundary data. Inverse Problems15, 1375-1391

Koufakis, I., Buxton, B. F. (Eds.) (1999). Very low bit rate face video compression using linear combination of 2D face views and principal components analysis. Image and Vision Computing17(14), 1031-1051

Lester, H., Arridge, S. R. (Eds.) (1999). A survey of hierarchical non-linear medical image registration. Pattern Recognition32, 129-149

Lester, H., Arridge, S. R., Jansons, K. M., Lemieux, L., Hajnal, J. V., Oatridge, A. (1999). Non-linear registration with the variable viscosity fluid algorithm. Lecture Notes in Computer Science1613, 238-251

Oliveira, J., Buxton, B. F. (1999). Creating light-weight virtual humans for virtual environments. Eurographics 1999 Proceedings. ( pp.15-18). Aire-la-Ville, Switzerland: Eurographics Association. Publisher URL

Rueckert, D., Sonoda, L. I., Hayes, C., Hill, D. L., Leach, M. O., Hawkes, D. J. (1999). Nonrigid registration using free-form deformations: application to breast MR images. IEEE TRANS MED IMAGING18(278-0062 (Print), 8), 712-721 Author URL

Ruff, C. F., Hughes, S. W., Hawkes, D. J. (1999). Volume estimation from sparse planar images using deformable models. Image and Vision Computing17(8), 559-565

Schnabel, J. A., Lemieux, L., Wieshmann, U. C., Arridge, S. R. (1999). Measurement of hippocampal volume changes in serial MRI scans. MEDICAL IMAGING 1999: IMAGE PROCESSING, PTS 1 AND 2. ( Vol. 3661 pp.1367-1376). SPIE-INT SOC OPTICAL ENGINEERING.

Schweiger, M., Arridge, S. R. (1999). Application of temporal filters to time resolved data in optical tomography. PHYS MED BIOL44(7), 1699-1717

Schweiger, M., Arridge, S. R. (1999). Optical tomographic reconstruction in a complex head model using a priori region boundary information. PHYS MED BIOL44(11), 2703-2721

Schweiger, M., Zhukov, L., Arridge, S. R., Johnson, C. R. (1999). Optical tomography using the SCIRun problem solving environment: Preliminary results for three-dimensional geometries and parallel processing. OPT EXPRESS4(8), 263-269

Studholme, C., Hill, D. L. G., Hawkes, D. J. (1999). An overlap invariant entropy measure of 3D medical image alignment . Pattern Recognition32, 71-86

1998

Arridge, S. R., Lionheart, W. R. B. (Eds.) (1998). Nonuniqueness in diffusion-based optical tomography. Optics Letters23, 882-884

Arridge, S. R., Schweiger, M. (1998). A gradient-based optimisation scheme for optical tomography. Optics Express2(6), 213-226

Barker, G. J., Simmons, A., Arridge, S. R., Tofts, P. S. (1998). A simple method for investigating the effects of non-uniformity of radiofrequency transmission and radiofrequency reception in MRI. BRIT J RADIOL71(841), 59-67

Buxton, B. F., Shafi, Z., Gilby, J. (1998). Evaluation of the construction of novel views by a combination of basis views. Signal Processign IX, Theories and Applications, Proc. of EUSIPCO'98, Ninth European Signal Processing Conference, Rhodes, Greece. ( Vol. 3 pp.1285-1288).

Chatterjee, N., Buxton, B. F. (1998). Shape modelling for drivable open terrains: some studies. Proc. Indian Conference on Computer Vision, Graphics and Image Processing (ICVGIP'98), New Delhi, India.

Dekker, L., Buxton, B. (1998). Automated landmarking for virtual human modelling. IEE Colloquium on Computer Vision for Virtual Human Modelling. ( pp.8/1-8/3). Stevenage, UK: Institution of Electrical Engineers. Publisher URL

Dekker, L., Khan, S., West, E., Buxton, B. F., Treleaven, P. (1998). Models for understanding the 3D human body form. Proc. of the IEEE International Workshop on Model-Based 3D Image Analysis at ICCV'98, The International Conference on Computer Vision, Indian Institute of Technogy, Mumbai, India. ( pp.65-74).

Edwards, P. J., Hill, D. L., Little, J. A., Hawkes, D. J. (1998). A three-component deformation model for image-guided surgery. MED IMAGE ANAL2(361-8415 (Print), 4), 355-367 Author URL

Fitzpatrick, J. M., Hill, D. L., Shyr, Y., West, J., Studholme, C., Maurer, C. R., Jr, (1998). Visual assessment of the accuracy of retrospective registration of MR and CT images of the brain. IEEE TRANS MED IMAGING17(278-0062 (Print), 4), 571-585 Author URL

Hawkes, D. J. (1998). Algorithms for radiological image registration and their clinical application. J ANAT193 ( Pt 3)(021-8782 (Print)), 347-361 Author URL

Hill, D. L., Maurer, C. R., Jr, M., R J, B., J A, F., J M, W., M, Y. (1998). Measurement of intraoperative brain surface deformation under a craniotomy. NEUROSURGERY43(148-396X (Print), 3), 514-526 Author URL

Hill, D. L., Maurer, C. R., Jr, S., C, F., J M, H., D, J. (1998). Correcting scaling errors in tomographic images using a nine degree of freedom registration algorithm. J COMPUT ASSIST TOMOGR22(363-8715 (Print), 2), 317-323 Author URL

Koufakis, I., Buxton, B. F. (1998). Linear combination of face views for low bit rate face video compression. Proc. EUSIPCO'98, The Ninth European Signal Processing Conference, Rhodes, Greece. ( Vol. 4 pp.2305-2309).

Maurer, C. R., Jr, H., D L, M., A J, L., H, M., M, R., D, L., D, H., W A, M., R E, H., D J, T., C, L. (1998). Investigation of intraoperative brain deformation using a 1.5-T interventional MR system: preliminary results. IEEE TRANS MED IMAGING17(278-0062 (Print), 5), 817-825 Author URL

Penney, G. P., Weese, J., Little, J. A., Desmedt, P., Hill, D. L., Hawkes, D. J. (1998). A comparison of similarity measures for use in 2-D-3-D medical image registration. IEEE TRANS MED IMAGING17(278-0062 (Print), 4), 586-595 Author URL

Prince, S. J. D., Eagle, R. A. E. (1998). Broad-band disparity masking in stereopsis with Gabor stimuli. PERCEPTION27, 104-105

Schnabel, J. A., Arridge, S. R. (Eds.) (1998). Active shape focusing. Image Vision Computing17(5/6), 419-428

Schweiger, M., Arridge, S. R. (1998). Comparison of two- and three-dimensional reconstruction methods in optical tomography. APPL OPTICS37(31), 7419-7428

Schweiger, M., Arridge, S. R. (Eds.) (1998). Comparison of 2D and 3D reconstruction methods in optical tomography. Applied Optics37(31), 7419-7428

Simmons, A., Arridge, S. R., Tofts, P. S., Barker, G. J. (1998). Application of the extremum stack to neurological MRI. IEEE Transactions on Medical Imaging17, 371-382

Southall, B., Buxton, B. F., Marchant, J. (1998). Controllability and observability: tools for Kalman filter design. BMVC 98: Proceedings of the Ninth British Machine Vision Conference. ( pp.164-173). British Machine Vision Association. Publisher URL

Southall, B., Marchant, J. A., Hague, T., Buxton, B. F. (1998). Model based tracking for navigation and segmentation. Computer Vision - ECCV'98: 5th European Conference on Computer Vision Freiburg, Germany, June, 2–6, 1998: Proceedings, Volume I. ( Vol. 1406 pp.797-811). Berlin/Heidelberg, Germany: Springer-Verlag. Publisher URL

1997

Alexander, D. C., Buxton, B. (1997). Modelling of Single Mode Distributions of Colour Data Using Directional Statistics. Proc. of the IEEE Conference on Computer Vision and Pattern Recognition. ( pp.319-324). IEEE.

Alexander, D. C., Buxton, B. F. (1997). Implementational Improvements for Active Region Models. BMVC97: Proceedings of the 8th British Machine Vision Conference, 8-11 September 1997, University of Essex. ( pp.370-379). Malvern, UK: The British Machine Vision Association. Publisher URL

Arridge, S. R., Hebden, J. C. (1997). Optical imaging in medicine .2. Modelling and reconstruction. Physics in Medicine and Biology42(5), 841-853

Arridge, S. R., Schweiger, M. (1997). Image reconstruction in optical tomography. Philosophical Transactions of the Royal Society B: Biological Sciences352(1354), 717-726

Arridge, S. R., Simmons, A. (1997). Multi-spectral probabilistic diffusion using Bayesian classification. LNCS 1252. ( pp.224-235). Berlin: Springer-Verlag.

Atkinson, D., Hill, D. L., Stoyle, P. N., Summers, P. E., Keevil, S. F. (1997). Automatic correction of motion artifacts in magnetic resonance images using an entropy focus criterion. IEEE TRANS MED IMAGING16(6), 903-910 Author URL

Hebden, J., Arridge, S. R. (1997). Imaging through scattering media by the use of an analytical model of perturbation amplitudes in the time domain. Applied Optics35(34), 6788-6796

Hebden, J., Arridge, S. R., Delpy, D. T. (1997). Optical imaging in medicine .1. Experimental techniques. Physics in Medicine and Biology42(5), 825-840

Hill, D. L., Langsaeter, L. A., Poynter-Smith, P. N., Emery, C. L., Summers, P. E., Keevil, S. F., Pracy, J. P., Walsh, R., Hawkes, D. J., Gleeson, M. J. (1997). Feasibility study of magnetic resonance imaging-guided intranasal flexible microendoscopy. COMPUT AIDED SURG2(092-9088 (Print), 5), 264-275 Author URL

Kadam, S., Roberts, G., Buxton, B. (1997). Design Patterns for Parallelizing Vision-Related Applications on Network of Workstations. Proc. 11th Annual International Symposium on High Performance Computing Systems (HPC'97). ( pp.569-583). Winnipeg: University of Manitoba.

Kwee, I. W., Tanikawa, Y., Proskurin, S., Arridge, S. R., Delpy, D. T., Yamada, Y. (1997). Performance of a nullspace-map image reconstruction algorithm. PROC S P I E(2979), 185-196

Lester, H., Arridge, S. R. (1997). Combining Fluid Deformations and Sline Warps: Fully Automatic Non-Linear Registration witha Large Number of Landmarks. Proc. of the 11th International Symposium and Exhibition: Computer Assisted Radiology and Surgery (CAR'97). ( pp.259-264). Amsterdam: Elsevier Science BV.

Lester, H., Arridge, S. R. (1997). Reducing the Blurring Effects of Successive Regridding in the Fluid Warp. Proc. of the 13th Israeli Symposium on Artificial Intelligence and Computer Vision (IAICV'97).

Lester, H., Arridge, S. R. (1997). Summarising Fluid Registration by Thin-Plate Spline Warps with Many Landmarks. Proc. of Medical Image Understanding and Analysis (MIUA'97). ( pp.53-56). BMVA.

Little, J. A., Hawkes, D. J. (1997). The registration of multiple medical images acquired from a single subject: why, how, what next? STAT METHODS MED RES6(962-2802 (Print), 3), 239-265 Author URL

Little, J. A., Hill, D. L. G., Hawkes, D. J. (1997). Deformations incorporating rigid structures . Computer Vision Image Understanding66(2), 223-232

Okada, E., Firbank, M., Schweiger, M., Arridge, S. R., Cope, M., Delpy, D. T. (1997). Theoretical and experimental investigation of near-infrared light propagation in a model of the adult head. Applied Optics36(1), 21-31

Schnabel, J. A., Arridge, S. R. (1997). Active Shape Focusing. Proc. of the 3rd International Workshop on Visual Form (IWVF3) on Advances in Visual Form Analysis. ( pp.492-501). World Scientific.

Schnabel, J. A., Arridge, S. R. (1997). Multi-Scale Shape Description in Medical Imaging. Proc. Medical Image Understanding and Analysis'97. ( pp.141-144). BMVA.

Schnabel, J. A., Arridge, S. R. (1997). Multi-scale active shape description. LNCS 1252. ( pp.337-340). Berlin: Springer-Verlag.

Schweiger, M., Arridge, S. R. (1997). Direct calculation with a finite-element method of the Laplace transform of the distribution of photon time of flight in tissue. APPL OPT ,36(34), 9042-9049

Schweiger, M., Arridge, S. R. (1997). Optimal data types in optical tomography. Information Processing in Medical Imaging (IPM'97 Proceedings)Lecture notes in Computer Science1230, 71-84

Schweiger, M., Arridge, S. R. (1997). The finite-element method for the propagation of light in scattering media: Frequency domain case. MED PHYS ,24(6), 895-902

Studholme, C., Hill, D. L., Hawkes, D. J. (1997). Automated three-dimensional registration of magnetic resonance and positron emission tomography brain images by multiresolution optimization of voxel similarity measures. MED PHYS24(094-2405 (Print), 1), 25-35 Author URL

Summers, P. E., Bhalerao, A. H., Hawkes, D. J. (1997). Multiresolution, model-based segmentation of MR angiograms. J MAGN RESON IMAGING7(053-1807 (Print), 6), 950-957 Author URL

Weese, J., Penney, G. P., Desmedt, P., Buzug, T. M., Hill, D. L., Hawkes, D. J. (1997). Voxel-based 2-D/3-D registration of fluoroscopy images and CT scans for image-guided surgery. IEEE TRANS INF TECHNOL BIOMED1(089-7771 (Print), 4), 284-293 Author URL

West, J., Fitzpatrick, J. M., Wang, M. Y., Dawant, B. M., Maurer, C. R., Jr, K., R M, M., R J, B., C, L., D, C., A, M., F, S., P, V., D, V. D. E., P A, N., S, S., T S, H., B, H., P F, H., D L, H., D J, S., C, M., J B, V., M A, M., G, W., R, P. (1997). Comparison and evaluation of retrospective intermodality brain image registration techniques. J COMPUT ASSIST TOMOGR21(363-8715 (Print), 4), 554-566 Author URL

Wong, J. C., Studholme, C., Hawkes, D. J., Maisey, M. N. (1997). Evaluation of the limits of visual detection of image misregistration in a brain fluorine-18 fluorodeoxyglucose PET-MRI study. EUR J NUCL MED24(340-6997 (Print), 6), 642-650 Author URL

1996

Alexander, D. C., Buxton, B. F. (1996). An evaluation of physically based statistical colour models for image region characterisation. Proceedings of the International Conference on Image Processing September 16 - 19,1996, Lausanne, Switzerland. ( Vol. 3 pp.1023-1026). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

Alexander, D. C., Buxton, B. F. (1996). Physically based statistical colour models for image region characterisation. RECPAD. ( pp.351-358).

Atkinson, D., Loh, W. H., O'Reilly, J. J., Laming, R. I. (1996). Numerical study of 10-cm chirped-fiber grating pairs for dispersion compensation at 10 Gb/s over 600 km of nondispersion shifted fiber. IEEE Photonics Technology Letters8(8), 1085-1087

Bladin, C. F., Colchester, A. C., Hawkes, D. J., Seifalian, A. M., Iqbal, N., Hardingham, C. R. (1996). Morphological and hemodynamic assessments of carotid stenosis using quantitative digital subtraction angiography. STROKE27(039-2499 (Print), 9), 1672-1678 Author URL

Buxton, B. F., Alexander, D. C. (1996). Making the most of your image: colour and statistics. RECPAD. ( pp.15-30).

Kwee, I. W., Tanikawa, Y., Proskurin, S. G., Arridge, S. R., Delpy, D. T., Yamada, Y. (1996). Nullspace regularization and MAP reconstruction in the ill-posed inverse imaging problem. Proceedings of SPIE2925, 43-54

Loh, W. H., Laming, R. I., Ellis, A. D., Atkinson, D. (1996). 10 Gbit/s Transmission over 700 km of Standard Single Mode Fibre with 10 cm Chirped Fibre Grating Compensator and Duobinary Transmitter. IEEE Photonics Technology Letters8(9), 1258-1260

Okada, E., Schweiger, M., Arridge, S. R., Firbank, M., Delpy, D. T. (1996). Experimental validation of Monte Carlo and finite-element methods for the estimation of the optical path length in inhomogeneous tissue. Applied Optics35(19), 3362-3371

Prince, S. J. D., Rogers, B. J. (1996). Disparity modulation thresholds in peripheral vision. INVEST OPHTH VIS SCI37(3), 1310-1310

Schnabel, J. A., Arridge, S. R. (1996). A multi-scale shape description tool for 3D MR brain images. CAR '96: COMPUTER ASSISTED RADIOLOGY. ( Vol. 1124 pp.292-297). ELSEVIER SCIENCE PUBL B V.

Schnabel, J. A., Arridge, S. R. (1996). Multiscale shape description of MR brain images using active contour models. MEDICAL IMAGING 1996: IMAGE PROCESSING. ( Vol. 2710 pp.596-606). SPIE - INT SOC OPTICAL ENGINEERING.

Schnabel, J. A., Wang, L. Q., Arridge, S. R. (1996). Shape description of spinal cord atrophy in patients with MS. CAR '96: COMPUTER ASSISTED RADIOLOGY. ( Vol. 1124 pp.286-291). ELSEVIER SCIENCE PUBL B V.

Simmons, A., Arridge, S. R., Barker, G. J., Williams, S. C. R. (1996). Simulation of MRI cluster plots and application to neurological segmentation. Magnetic Resonance Imaging14(1), 73-92 doi:10.1016/0730-725X(95)02040-Z. Author URL

Studholme, C., Hill, D. L., Hawkes, D. J. (1996). Automated 3-D registration of MR and CT images of the head. MED IMAGE ANAL1(361-8415 (Print), 2), 163-175 Author URL

Thomas, D. G., Doshi, P., Colchester, A., Hawkes, D. J., Hill, D. L., Zhao, J., Maitland, N., Strong, A. J., Evans, R. I. (1996). Craniotomy guidance using a stereo-video-based tracking system. STEREOTACT FUNCT NEUROSURG66(011-6125 (Print), 1-3), 81-83 Author URL

Wong, W. L., Hussain, K., Chevretton, E., Hawkes, D. J., Baddeley, H., Maisey, M., McGurk, M. (1996). Validation and clinical application of computer-combined computed tomography and positron emission tomography with 2-[18F]fluoro-2-deoxy-D-glucose head and neck images. AM J SURG172(002-9610 (Print), 6), 628-632 Author URL

1995

ARRIDGE, S. R., HIRAOKA, M., SCHWEIGER, M. (1995). Modelling of noise for near-infrared transillumination imaging. OPTICAL TOMOGRAPHY, PHOTON MIGRATION, AND SPECTROSCOPY OF TISSUE AND MODEL MEDIA: THEORY, HUMAN STUDIES, AND INSTRUMENTATION, PROCEEDINGS OF, PTS 1 AND 2. ( Vol. 2359 pp.389-399). SPIE - INT SOC OPTICAL ENGINEERING.

ARRIDGE, S. R., SCHWEIGER, M. (1995). Reconstruction in optical tomography using MRI based prior knowledge. INFORMATION PROCESSING IN MEDICAL IMAGING. ( Vol. 3 pp.77-88). KLUWER ACADEMIC PUBL.

ARRIDGE, S. R., SCHWEIGER, M. (1995). Sensitivity to prior knowledge in optical tomographic reconstruction. OPTICAL TOMOGRAPHY, PHOTON MIGRATION, AND SPECTROSCOPY OF TISSUE AND MODEL MEDIA: THEORY, HUMAN STUDIES, AND INSTRUMENTATION, PROCEEDINGS OF, PTS 1 AND 2. ( Vol. 2359 pp.378-388). SPIE - INT SOC OPTICAL ENGINEERING.

Arridge, S. R. (1995). PHOTON-MEASUREMENT DENSITY-FUNCTIONS .1. ANALYTICAL FORMS. Applied Optics34(31), 7395-7409

Arridge, S. R., Hiraoka, M., Schweiger, M. (1995). STATISTICAL BASIS FOR THE DETERMINATION OF OPTICAL PATHLENGTH IN TISSUE. Physics in Medicine and Biology40(9), 1539-1558

Arridge, S. R., Schweiger, M. (1995). DIRECT CALCULATION OF THE MOMENTS OF THE DISTRIBUTION OF PHOTON TIME-OF-FLIGHT IN TISSUE WITH A FINITE-ELEMENT METHOD. Applied Optics34(15), 2683-2687

Edwards, P. J., Hawkes, D. J., Hill, D. L., Jewell, D., Spink, R., Strong, A., Gleeson, M. (1995). Augmentation of reality using an operating microscope for otolaryngology and neurosurgical guidance. J IMAGE GUID SURG1(078-7844 (Print), 3), 172-178 Author URL

Okada, E., Firbank, M., Schweiger, M., Arridge, S. R., Cope, M., Delpy, D. T. (1995). A theoretical and experimental investigation of the effect of sulci on light propagation in brain tissue. Proceedings of SPIE2626, 2-8 Author URL

Okada, E., Firbank, M., Schweiger, M., Arridge, S. R., Hebden, J. C., Hiraoka, M., Delpy, D. T. (1995). Experimental measurements on phantoms and Monte Carlo simulation to evaluate the effect of inhomogeneity on optical pathlength. Proceedings of SPIE2389, 174-181 Author URL

SCHWEIGER, M., ARRIDGE, S. R. (1995). Near-infrared imaging: Photon measurement density functions. OPTICAL TOMOGRAPHY, PHOTON MIGRATION, AND SPECTROSCOPY OF TISSUE AND MODEL MEDIA: THEORY, HUMAN STUDIES, AND INSTRUMENTATION, PROCEEDINGS OF, PTS 1 AND 2. ( Vol. 2359 pp.366-377). SPIE - INT SOC OPTICAL ENGINEERING.

SIMMONS, A., ARRIDGE, S. R., BARKER, G. J. (1995). Simulation of MRI cluster plots. INFORMATION PROCESSING IN MEDICAL IMAGING. ( Vol. 3 pp.399-400). KLUWER ACADEMIC PUBL.

Schnabel, J. A., Arridge, S. R. (1995). Active contour models for shape description using multiscale differential invariants. PROCEEDINGS OF THE 6TH BRITISH MACHINE VISION CONFERENCE 1995, VOLS 1 AND 2. ( pp.197-206). B M V A PRESS.

Schweiger, M., Arridge, S. R., Hiraoka, M., Delpy, D. T. (1995). THE FINITE-ELEMENT METHOD FOR THE PROPAGATION OF LIGHT IN SCATTERING MEDIA - BOUNDARY AND SOURCE CONDITIONS. Medical Physics22(11), 1779-1792

Zouganeli, P., Stevens, P. J., Atkinson, D., Parry, G. (1995). Design Trade-Offs and Evaluation of the Performance Attainable by GaAs-Al0.3Ga0.7As Asymmetric Fabry-Perot Modulators. IEEE Journal of Quantum Electronics31(5), 927-943

1994

Atkinson, D., Loh, W. H., Afanasjev, V. V., Grudinin, A. B., Seeds, A. J., Payne, D. N. (1994). INCREASED AMPLIFIER SPACING IN A SOLITON SYSTEM WITH QUANTUM-WELL SATURABLE ABSORBERS AND SPECTRAL FILTERING. Optics Letters19(19), 1514-1516

Atkinson, D., Loh, W. H., Afanasjev, V. V., Grudinin, A. B., Seeds, A. J., Payne, D. N. (1994). Increased Amplifier Spacing Using Quantum Well Saturable Ab sorbers and Spectral Filtering in a Soliton System. ECOC. ( pp.237-240).

Gandhe, A. J., Hill, D. L., Studholme, C., Hawkes, D. J., Ruff, C. F., Cox, T. C., Gleeson, M. J., Strong, A. J. (1994). Combined and three-dimensional rendered multimodal data for planning cranial base surgery: a prospective evaluation. NEUROSURGERY35(148-396X (Print), 3), 463-470 Author URL

Griffin, L. D., Colchester, A. C. F., Roll, S. A., Studholme, C. S. (1994). Hierarchical segmentation satisfying constraints. BMVC94: Proceedings of the 5th British Machine Vision Conference, 13-16 September 1994, University of York, York. ( pp.135-144). Guildford, UK: BMVA Press. Publisher URL

Hawkes, D. J., Seifalian, A. M., Colchester, A. C., Iqbal, N., Hardingham, C. R., Bladin, C. F., Hobbs, K. E. (1994). VALIDATION OF VOLUME BLOOD-FLOW MEASUREMENTS USING 3-DIMENSIONAL DISTANCE-CONCENTRATION FUNCTIONS DERIVED FROM DIGITAL X-RAY ANGIOGRAMS. INVEST RADIOL29(020-9996 (Print), 4), 434-442 Author URL

Hill, D. L. G., Hawkes, D. J. (1994). Medical image registration using knowledge of adjacency of anatomical structures. Image and Vision Computing12, 173-178

Hill, D. L., Hawkes, D. J., Gleeson, M. J., Cox, T. C., Strong, A. J., Wong, W. L., Ruff, C. F., Kitchen, N. D., Thomas, D. G., Sofat, A. (1994). Accurate frameless registration of MR and CT images of the head: applications in planning surgery and radiation therapy. Radiology191(2), 447-454 Author URL

Roll, S. A., Colchester, A. C. F., Summers, P. E., Griffin, L. D. (1994). Intensity-based object extraction from 3D medical images including a correction for partial volume errors. Proceedings of the British Machine Vision Conference 1994. ( pp.205-214). Malvern, UK: The British Machine Vision Association. Publisher URL

SIMMONS, A., TOFTS, P. S., BARKER, G. J., ARRIDGE, S. R. (1994). SOURCES OF INTENSITY NONUNIFORMITY IN SPIN-ECHO IMAGES AT 1.5-T. MAGNET RESON MED32(1), 121-128

SYLLAIOS, A. J., ANDERSON, J. M., COLOMBO, L., LITTLER, C. L., BROSTOW, G. J., CHRISTENSEN, C. R., GRISHAM, J. A., CLARKE, F. W. (1994). MAGNETOOPTICAL CHARACTERIZATION OF HGCDTE THIN-FILMS. PRODUCIBILITY OF II-VI MATERIALS AND DEVICES. ( Vol. 2228 pp.309-315). SPIE - INT SOC OPTICAL ENGINEERING.

Simmons, A., Arridge, S. R., Barker, G. J., Cluckie, A. J., Tofts, P. S. (1994). IMPROVEMENTS TO THE QUALITY OF MRI CLUSTER-ANALYSIS. Magnetic Resonance Imaging12(8), 1191-1204 Author URL

Simmons, A., Barker, G. J., Tofts, P. S., Gass, A., Arridge, S. R. (1994). A METHOD FOR VISUALIZATION OF MRI PARTIAL VOLUME REGIONS - PAIR (PARTIAL VOLUME SENSITIZED INVERSION-RECOVERY IMAGING). Magnetic Resonance Imaging12(5), 821-826 doi:10.1016/0730-725X(94)92207-1. Author URL

Simmons, A., Tofts, P. S., Barker, G. J., Arridge, S. R. (1994). Sources of intensity non-uniformity in spin echo images at 1.5T. Magnetic Resonance in Medicine32(1), 1191-1204 Author URL

1993

ARRIDGE, S. R., SCHWEIGER, M. (1993). THE USE OF MULTIPLE DATA-TYPES IN TIME-RESOLVED OPTICAL-ABSORPTION AND SCATTERING TOMOGRAPHY (TOAST). MATHEMATICAL METHODS IN MEDICAL IMAGING II. ( Vol. 2035 pp.218-229). SPIE - INT SOC OPTICAL ENGINEERING.

Arridge, S. R., Schweiger, M. (1993). Inverse Methods for Optical Tomography. IPMI. ( Vol. 687 pp.259-277). Springer. Publisher URL

Arridge, S. R., Schweiger, M., Hiraoka, M., Delpy, D. T. (1993). A FINITE-ELEMENT APPROACH FOR MODELING PHOTON TRANSPORT IN TISSUE. Medical Physics20, 299-309

Arridge, S. R., Schweiger, M., Hiraoka, M., Delpy, D. T. (1993). PERFORMANCE OF AN ITERATIVE RECONSTRUCTION ALGORITHM FOR NEAR-INFRARED ABSORPTION AND SCATTER IMAGING. Proceedings of SPIE(1888), 360-371 Author URL

ESSENPREIS, M., ELWELL, C. E., COPE, M., VANDERZEE, P., ARRIDGE, S. R., DELPY, D. T. (1993). SPECTRAL DEPENDENCE OF TEMPORAL POINT SPREAD FUNCTIONS IN HUMAN TISSUES. APPL OPTICS32(4), 418-425

Essenpreis, M., Cope, M., Elwell, C., Arridge, S., van der Zee, P., Delpy, D. (1993). WAVELENGTH DEPENDENCE OF THE DIFFERENTIAL PATHLENGTH FACTOR AND THE LOG SLOPE IN TIME-RESOLVED TISSUE SPECTROSCOPY. Advances in Experimental Medicine and Biology. ( Vol. 333 pp.9-20). Author URL

Hill, D. L. G., Hawkes, D. J., Hussain, Z., Green, S. E. M., Ruff, C. F., Robinson, G. P. (1993). Accurate combination of CT and MR data of the head: Validation and applications in surgical and therapy planning. Computerized Medical Imaging17, 357-362 Author URL

Hiraoka, M., Firbank, M., Essenpreis, M., Cope, M., Arridge, S. R., van der Zee, P., Delpy, D. T. (1993). A MONTE-CARLO INVESTIGATION OF OPTICAL PATHLENGTH IN INHOMOGENEOUS TISSUE AND ITS APPLICATION TO NEAR-INFRARED SPECTROSCOPY. Physics in Medicine and Biology38, 1859-1876

Hiraoka, M., Firbank, M., Essenpreis, M., Cope, M., Arridge, S. R., van der Zee, P., Delpy, D. T. (1993). MONTE-CARLO SIMULATION OF LIGHT TRANSPORT THROUGH INHOMOGENEOUS TISSUE. 1888, 149-159 Author URL

Loh, W. H., Atkinson, D., Morkel, P. R., Grey, R., Seeds, A. J., Payne, D. N. (1993). DIODE-PUMPED SELF-STARTING PASSIVELY MODELOCKED NEODYMIUM-DOPED FIBER LASER. Electronics Letters29(9), 808-810

Loh, W. H., Atkinson, D., Morkel, P. R., Hopkinson, M., Rivers, A., Seeds, A. J., Payne, D. N. (1993). ALL-SOLID-STATE SUBPICOSECOND PASSIVELY MODE-LOCKED ERBIUM-DOPED FIBER LASER. Applied Physics Letters63(1), 4-6

Loh, W. H., Atkinson, D., Morkel, P. R., Hopkinson, M., Rivers, A., Seeds, A. J., Payne, D. N. (1993). PASSIVELY MODE-LOCKED ER3+ FIBER LASER USING A SEMICONDUCTOR NONLINEAR MIRROR. IEEE Photonics Technology Letters5(1), 35-37

Neelin, P., Crossman, J., Hawkes, D. J., Ma, Y., Evans, A. C. (1993). Validation of an MRI/PET landmark registration method using 3D simulated PET images and point simulations. COMPUT MED IMAGING GRAPH17(895-6111 (Print), 4-5), 351-356 Author URL

SCHWEIGER, M., ARRIDGE, S. R., HIRAOKA, M., FIRBANK, M., DELPY, D. T. (1993). COMPARISON OF A FINITE-ELEMENT FORWARD MODEL WITH EXPERIMENTAL PHANTOM RESULTS - APPLICATION TO IMAGE-RECONSTRUCTION. PROCEEDINGS OF PHOTON MIGRATION AND IMAGING IN RANDOM MEDIA AND TISSUES. ( Vol. 1888 pp.179-190). SPIE - INT SOC OPTICAL ENGINEERING.

Schweiger, M., Arridge, S. R., Delpy, D. T. (1993). Application of the finite-element method for the forward and inverse models in optical tomography. Journal of Mathematical Imaging and Vision3, 263-283

1992

Arridge, S. R., Cope, M., Delpy, D. T. (1992). THE THEORETICAL BASIS FOR THE DETERMINATION OF OPTICAL PATHLENGTHS IN TISSUE - TEMPORAL AND FREQUENCY-ANALYSIS. Physics in Medicine and Biology37(7), 1531-1560 Author URL

Arridge, S. R., Schweiger, M., Delpy, D. T. (1992). ITERATIVE RECONSTRUCTION OF NEAR-INFRARED ABSORPTION IMAGES. Proceedings of SPIE1767, 372-383

Brunt, J. N., Wicks, D. A., Hawkes, D. J., Seifalian, A. M., du Boulay, G. H., Colchester, A. F., Wallis, A. (1992). The measurement of blood flow waveforms from X-ray angiography. Part 1: Principles of the method and preliminary validation. PROC INST MECH ENG [H ]206(954-4119 (Print), 2), 73-85 Author URL

Colchester, A. C. F., Robinson, G. P., Griffin, L. D. (1992). A unified approach to the segmentation of grey-level and dot-pattern images. 11th IAPR International Conference on Pattern Recognition, 1992. Vol.III. Conference C: Image, Speech and Signal Analysis, Proceedings. ( pp.319-322). Los Alamitos, US: IEEE Computer Society Press. Publisher URL

Maisey, M. N., Hawkes, D. J., Lukawieck-Vydelingum, A. M. (1992). Synergistic imaging. EUR J NUCL MED19(340-6997 (Print), 12), 1002-1005 Author URL

SIMMONS, A., ARRIDGE, S. R., BARKER, G. J., TOFTS, P. S. (1992). SEGMENTATION OF NEUROANATOMY IN MAGNETIC-RESONANCE IMAGES. MEDICAL IMAGING VI : IMAGE PROCESSING. ( Vol. 1652 pp.2-13). SPIE - INT SOC OPTICAL ENGINEERING.

Schweiger, M., Arridge, S. R., Hiraoka, M., Delpy, D. T. (1992). APPLICATION OF THE FINITE-ELEMENT METHOD FOR THE FORWARD MODEL IN INFRARED-ABSORPTION IMAGING. Proceedings of SPIE1768, 97-108 Author URL

VANDERZEE, P., COPE, M., ARRIDGE, S. R., ESSENPREIS, M., POTTER, L. A., EDWARDS, A. D., WYATT, J. S., MCCORMICK, D. C., ROTH, S. C., REYNOLDS, E. O. R., DELPY, D. T. (1992). EXPERIMENTALLY MEASURED OPTICAL PATHLENGTHS FOR THE ADULT HEAD, CALF AND FOREARM AND THE HEAD OF THE NEWBORN-INFANT AS A FUNCTION OF INTER OPTODE SPACING. OXYGEN TRANSPORT TO TISSUE XIII. ( Vol. 316 pp.143-153). PLENUM PRESS DIV PLENUM PUBLISHING CORP.

Whitehead, M., Stevens, P., Rivers, A., Barnes, P., Atkinson, D. R., J S, B., C, W., K, R., C, (1992). The Design and Application of 111-V Multiquantum Well Optical Modulators. Physica ScriptaT35, 210-214

1991

Arridge, S. R., van der Zee, P., Cope, M., Delpy, D. T. (1991). RECONSTRUCTION METHODS FOR INFRARED-ABSORPTION IMAGING. Proceedings of SPIE1431, 204-215 Author URL

Cope, M., van der Zee, P., Essenpreis, M., Arridge, S. R., Delpy, D. T. (1991). DATA-ANALYSIS METHODS FOR NEAR-INFRARED SPECTROSCOPY OF TISSUE - PROBLEMS IN DETERMINING THE RELATIVE CYTOCHROME AA3 CONCENTRATION. Proceedings of SPIE1431, 251-262 Author URL

Hawkes, D. J., Hardingham, C. R., Colchester, A. C. (1991). Matching of geometric models in the analysis of lumen shape in digital X-ray angiography. PROG CLIN BIOL RES363(361-7742 (Print)), 341-353 Author URL

Hawkes, D. J., Robinson, L., Crossman, J. E., Sayman, H. B., Mistry, R., Maisey, M. N., Spencer, J. D. (1991). Registration and display of the combined bone scan and radiograph in the diagnosis and management of wrist injuries. EUR J NUCL MED18(340-6997 (Print), 9), 752-756 Author URL

Hill, D. L., Hawkes, D. J., Crossman, J. E., Gleeson, M. J., Cox, T. C., Bracey, E. E., Strong, A. J., Graves, P. (1991). Registration of MR and CT images for skull base surgery using point-like anatomical features. BR J RADIOL64(007-1285 (Print), 767), 1030-1035 Author URL

Lehmann, E. D., Hawkes, D. J., Hill, D. L., Bird, C. F., Robinson, G. P., Colchester, A. C., Maisey, M. N. (1991). Computer-aided interpretation of SPECT images of the brain using an MRI-derived 3D neuro-anatomical atlas. MED INFORM (LOND)16(307-7640 (Print), 2), 151-166 Author URL

Lynch, J. A., Hawkes, D. J., Buckland-Wright, J. C. (1991). A robust and accurate method for calculating the fractal signature of texture in macroradiographs of osteoarthritic knees. MED INFORM (LOND)16(307-7640 (Print), 2), 241-251 Author URL

Lynch, J. A., Hawkes, D. J., Buckland-Wright, J. C. (1991). Analysis of texture in macroradiographs of osteoarthritic knees using the fractal signature. PHYS MED BIOL36(031-9155 (Print), 6), 709-722 Author URL

Parry, G., Whitehead, M., Stevens, P., Rivers, A., Barnes, P., Atkinson, D., Roberts, J. S., Button, C., Woodbridge, K., Roberts, C. (1991). The design and application of III-V multiquantum well optical modulators. Physica Scripta, 210-214

Seifalian, A. M., Hawkes, D. J., Hardingham, C. R., Colchester, A. C., Reidy, J. F. (1991). VALIDATION OF A QUANTITATIVE RADIOGRAPHIC TECHNIQUE TO ESTIMATE PULSATILE BLOOD-FLOW WAVE-FORMS USING DIGITAL SUBTRACTION ANGIOGRAPHIC DATA. J BIOMED ENG13(141-5425 (Print), 3), 225-233 Author URL

Seifalian, A. M., Stansby, G. P., Hobbs, K. E., Hawkes, D. J., Colchester, A. C. (1991). Measurement of liver blood flow: a review. HPB SURG4(894-8569 (Print), 3), 171-186 Author URL

1990

ARRIDGE, S. R. (1990). MANIPULATION OF VOLUME DATA FOR SURGICAL SIMULATION. 3D IMAGING IN MEDICINE. ( Vol. 60 pp.289-300). SPRINGER-VERLAG BERLIN.

ARRIDGE, S. R., LINNEY, A. D. (1990). INTERACTIVE OBJECT DISSECTION USING AN ARBITRARY VOLUME MASK. S/CAR 90 : COMPUTER APPLICATIONS TO ASSIST RADIOLOGY. ( pp.205-211). SYMPOSIA FOUNDATION.

ARRIDGE, S. R., VANDERZEE, P., COPE, M., DELPY, D. T. (1990). NEW RESULTS FOR THE DEVELOPMENT OF INFRARED-ABSORPTION IMAGING. BIOMEDICAL IMAGE PROCESSING. ( Vol. 1245 pp.92-103). SPIE - INT SOC OPTICAL ENGINEERING.

Arridge, S. R., Van der Zee, P., Cope, M., Delpy, D. T. (1990). New results for the development of infrared absorption imaging. BIOMEDICAL IMAGE PROCESSING, PROC SPIE1245, 91-103

Atkinson, D., Parry, G., Austin, E. J. (1990). Modelling of Electro-Absorption in Coupled Quantum Wells with Applications to Low-Voltage Optical Modulation. Semiconductor Science and Technology5, 516-524

Parry, G., Whitehead, M., Stevens, P., Rivers, A., Barnes, P., Atkinson, D., Roberts, J. S., Button, C., Woodbridge, K., Roberts, C. (1990). The Design and Application of III-V Multiquantum Well Optical Modulators. 10th General Conference of the Condensed Matter Division of the European Physical Society.

VANDERZEE, P., ARRIDGE, S. R., COPE, M., DELPY, D. T. (1990). THE EFFECT OF OPTODE POSITIONING ON OPTICAL PATHLENGTH IN NEAR-INFRARED SPECTROSCOPY OF BRAIN. OXYGEN TRANSPORT TO TISSUE XII. ( Vol. 277 pp.79-84). PLENUM PRESS DIV PLENUM PUBLISHING CORP.

1989

ARRIDGE, S. R., GRINDROD, S. R., LINNEY, A. D., TOFTS, P. S., WICKS, D. (1989). USING GREYSCALE VOXEL DATABASES FOR IMPROVED SHADING AND SEGMENTATION. MED INFORM14(2), 157-171

Arridge, S. R., van der Zee, P., Delpy, D. T., Cope, M. (1989). Particle sizing in the Mie scattering region: singular value analysis. Inverse Problems5, 671-689

LINNEY, A. D., GRINDROD, S. R., ARRIDGE, S. R., MOSS, J. P. (1989). 3-DIMENSIONAL VISUALIZATION OF COMPUTERIZED-TOMOGRAPHY AND LASER SCAN DATA FOR THE SIMULATION OF MAXILLO-FACIAL SURGERY. MED INFORM14(2), 109-121

Seifalian, A. M., Hawkes, D. J., Colchester, A. C., Hobbs, K. E. (1989). A NEW ALGORITHM FOR DERIVING PULSATILE BLOOD-FLOW WAVEFORMS TESTED USING SIMULATED DYNAMIC ANGIOGRAPHIC DATA. NEURORADIOLOGY31(028-3940 (Print), 3), 263-269 Author URL

1988

MOSS, J. P., GRINDROD, S. R., LINNEY, A. D., ARRIDGE, S. R., JAMES, D. (1988). A COMPUTER-SYSTEM FOR THE INTERACTIVE PLANNING AND PREDICTION OF MAXILLOFACIAL SURGERY. AM J ORTHOD DENTOFAC94(6), 469-475

1987

MOSS, J. P., LINNEY, A. D., GRINDROD, S. R., ARRIDGE, S. R., CLIFTON, J. S. (1987). 3-DIMENSIONAL VISUALIZATION OF THE FACE AND SKULL USING COMPUTERIZED-TOMOGRAPHY AND LASER SCANNING TECHNIQUES. EUR J ORTHODONT9(4), 247-253

1986

Hawkes, D. J., Jackson, D. F., Parker, R. P. (1986). Tissue analysis by dual-energy computed tomography. BR J RADIOL59(007-1285 (Print), 702), 537-542 Author URL

1985

ARRIDGE, S. R., COPE, M., VANDERZEE, P., HILLSON, P. J., DELPHY, D. T. (1985). NEAR-INFRARED TRANS-ILLUMINATION AS A METHOD OF VISUALIZATION AND MEASUREMENT OF THE OXYGENATION STATE OF BRAIN AND MUSCLE IN NEWBORN-INFANTS. J PHOTOGR SCI33(6), 227-227

1983

Jackson, D. F., Hawkes, D. J. (1983). Energy dependence in the spectral factor approach to computed tomography. PHYS MED BIOL28(031-9155 (Print), 3), 289-293 Author URL

1982

Husband, J. E., Hawkes, D. J., Peckham, M. J. (1982). CT estimations of mean attenuation values and volume in testicular tumors: a comparison with surgical and histologic findings. RADIOLOGY144(033-8419 (Print), 3), 553-558 Author URL

1980

Hawkes, D. J., Jackson, D. F. (1980). An accurate parametrisation of the x-ray attenuation coefficient. PHYS MED BIOL25(031-9155 (Print), 6), 1167-1171 Author URL

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